LOCUS BC033861 1023 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens LSM domain containing 1, mRNA (cDNA clone MGC:44900 IMAGE:5171094), complete cds. ACCESSION BC033861 VERSION BC033861.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1023) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1023) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: j Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254987. FEATURES Location/Qualifiers source 1..1023 /db_xref="H-InvDB:HIT000041998" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44900 IMAGE:5171094" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1023 /gene="LSMD1" /gene_synonym="MGC14151" /gene_synonym="PFAAP2" /db_xref="GeneID:84316" /db_xref="HGNC:HGNC:28212" CDS 432..953 /gene="LSMD1" /gene_synonym="MGC14151" /gene_synonym="PFAAP2" /codon_start=1 /product="LSM domain containing 1" /protein_id="AAH33861.1" /db_xref="GeneID:84316" /db_xref="HGNC:HGNC:28212" /translation="MAVAVGVRAAPVLGLARALVLGLRGSQAARWRGWGTAAPGSLWA LCECPAGCRELWFRGRAAWAARSERLLHPAQDSDGEREDSAAERARQQLEALLNKTMR IRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVLGLAMVPGHHIVSI EVQRESLTGPPYL" BASE COUNT 246 a 251 c 334 g 192 t ORIGIN 1 gcagagaacg aatacgctcc gttttaattc agtggcctgg gctacatggg atatttagga 61 cagactatct ctctgagaca gaaaaacaag ggaggaggca gtatgaaaga atgtattctc 121 gctaaattcc agtttctaaa ggatgtgtaa gaaaccagag gtaaaggtct cgcgatatct 181 taagacatcc ggcgtagtac gcttcagtga gccacagcgc tagagaagta ggagaagctc 241 gcgagatctg tgccgttgcc gaggagacta ggagggggag gagaggggat ctcgcgaaag 301 gaaagaggtc gggagcgctc gcgagatctc ggaccaccca acctgaaagg tgcttaggaa 361 gttgaaaggc ccagaggagg cctccgggca aatggccgga gctggaccga ccatgctgct 421 acgagaagag aatggctgtt gcagtcggcg tcagagcagc tccagtgctg gggttagcac 481 gggctctggt tctgggactg aggggcagtc aagcagcaag atggaggggg tggggaactg 541 cagctcccgg cagcctctgg gctttgtgtg agtgccccgc gggctgccgg gagctgtggt 601 tccgcgggcg ggcagcctgg gctgcgcggt ctgagcgctt gttacacccc gcgcaggatt 661 cggacggaga gcgcgaggac tcggcggctg agcgcgcccg acagcagcta gaggcgctgc 721 tcaacaagac tatgcgcatt cgcatgacag atggacggac actggtcggc tgcttcctct 781 gcactgaccg tgactgcaat gtcatcctgg gctcggcgca ggagttcctc aagccgtcgg 841 attccttctc tgccggggag ccccgtgtgc tgggcctggc catggtaccc ggacaccaca 901 tcgtttccat tgaggtgcag agggagagtc tgaccgggcc tccgtatctc tgaccacgat 961 ggcgcttacc tttcagactt cattaaactt atgaccgaaa aaaaaaaaaa aaaaaaaaaa 1021 aaa //