LOCUS BC033853 1001 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens immunity-related GTPase family, cinema, mRNA (cDNA
clone IMAGE:5165357), partial cds.
ACCESSION BC033853
VERSION BC033853.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: h Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45433541.
FEATURES Location/Qualifiers
source 1..1001
/db_xref="H-InvDB:HIT000093251"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5165357"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1001
/gene="IRGC"
/gene_synonym="CINEMA"
/gene_synonym="Iigp5"
/gene_synonym="R30953_1"
/db_xref="GeneID:56269"
/db_xref="HGNC:HGNC:28835"
CDS 148..>1001
/gene="IRGC"
/gene_synonym="CINEMA"
/gene_synonym="Iigp5"
/gene_synonym="R30953_1"
/codon_start=1
/product="IRGC protein"
/protein_id="AAH33853.1"
/db_xref="GeneID:56269"
/db_xref="HGNC:HGNC:28835"
/translation="MATSKLPVVPGEEENTILMAKERLEALRTAFESGDLPQAASHLQ
ELLASTESIRLEVGVTGESGAGKSSLINALRGLEAEDPGAALTGVMETTMQPSPYPHP
QFPDVTLWDLPGAGSPGCPADKYLKQVDFSRYNFFLLVSPRRCGAVETRLAAEILCQG
KKFYFVRTKVDEDLAATRTQRPSGFREAAVLQEIRDHCAERLREAGVADPRIFLVSNL
SPARYDFPTLVSTWEHDLPSHRRHAGLLSLPDISLEALQKKKAMLQEQVLKTALVLGV
IQALPVPGL"
BASE COUNT 171 a 346 c 313 g 171 t
ORIGIN
1 cggtgtctga ccttggctaa gagggaagga gatcctatca gtggggagag tgtgagggga
61 gagggagagc ctgcagggca ggcgctgagg atcacgcatc ctgtgactct cccctgtccc
121 ccgccaccct ctgaaccact ggccaccatg gctacttcaa agttgcccgt ggtgcctggg
181 gaggaggaaa acaccatcct tatggccaag gaaaggctgg aggccctgcg cacagccttt
241 gagtcgggtg acctccccca ggccgcctct cacctccagg agctgctggc ctccacggaa
301 agcatccgcc tggaggtggg cgtcacgggc gagtcgggcg cgggcaagtc ctccctcatc
361 aatgccctgc gtggcctgga ggccgaggac cctggcgcgg ctctcacggg cgtcatggag
421 accacgatgc aaccgtcgcc ctatccacac ccacagttcc ctgacgtgac cctctgggac
481 ctgccaggag ccggctctcc aggctgcccg gctgacaagt acctaaagca ggtagacttc
541 agccgctata acttcttcct gctggtctcc ccccgccgct gcggggccgt cgagacccgc
601 ctggccgctg agatcctgtg ccagggcaag aagttctact ttgtgcgcac caaggtggac
661 gaggacctgg cggccacgcg cacccagcgg ccgtcgggct tcagagaggc cgctgtcctg
721 caggagatcc gagaccactg tgccgagcgg ctgcgggagg ccggcgtggc tgaccctcgc
781 atcttcctgg tgtccaacct ctcgccggcc cgctacgact ttcccacgct ggtgtccacc
841 tgggagcacg acctgccctc ccaccggcgc cacgctggcc tgctgtcgct ccccgacatc
901 tcgctggagg ccttgcagaa gaagaaggcc atgcttcaag agcaagtcct caagaccgcc
961 ctggtgttgg gcgtcatcca ggccctgccg gtcccagggc t
//