LOCUS BC033804 1730 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member
9, mRNA (cDNA clone IMAGE:5188093), complete cds.
ACCESSION BC033804
VERSION BC033804.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: l Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5032134
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000041967"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5188093"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1730
/gene="ABCC9"
/gene_synonym="ABC37"
/gene_synonym="CMD1O"
/gene_synonym="SUR2"
/db_xref="GeneID:10060"
/db_xref="HGNC:HGNC:60"
/db_xref="MIM:601439"
CDS 400..849
/gene="ABCC9"
/gene_synonym="ABC37"
/gene_synonym="CMD1O"
/gene_synonym="SUR2"
/codon_start=1
/product="ABCC9 protein"
/protein_id="AAH33804.1"
/db_xref="GeneID:10060"
/db_xref="HGNC:HGNC:60"
/db_xref="MIM:601439"
/translation="MSLSFCGNNISSYNINDGVLQNSCFVDALNLVPHVFLLFITFPI
LFIGWGSQSSKVQIHHNTWLHFPGHNLRWILTFALLFVHVCEIAEGIVSDSRRESRHL
HLFMPAVMGFVATTTSIVYYHNIETSNFPKLLLGFSHHESKSCYQHS"
BASE COUNT 478 a 313 c 338 g 601 t
ORIGIN
1 ggggaaggtc tccggcccca ggcgcggcgc gcggggcttc tgcccagttt cctgcttctc
61 agccgcggtg tctgccccgg cccagagcag tctgtgcaat ttagaaactc gataggaggc
121 agcagctggt ctcccaccac cctaaaaata atccgttccg gcgcactgcg tgcttcgcct
181 aggggaggaa aactgtcatc ggagagttct gcgtccgggt ttgaaattta catcttaaga
241 cagtgtagga agtcggtgtt ttgaaggtag ctcaagtgca ccggcagggg tttgaagcag
301 cgtgaagcta ttgcccaagg aaaagtattg tttgtgacca ttgctaaatc aattatcaat
361 gaaaggaaag aaagaaaaga gtaaaccata taagaagaaa tgagcctttc attttgtggt
421 aacaacattt cttcatataa tatcaacgat ggtgtactac aaaattcctg ctttgtggat
481 gccctcaacc tggtccctca tgtctttctg ttgtttatca cttttccaat attgtttatt
541 gggtggggga gccaaagctc aaaagtacaa attcaccaca acacatggct tcattttccg
601 ggacataacc tgagatggat tcttacattc gctctcctgt ttgtgcatgt ctgtgaaata
661 gcagaaggca ttgtttcaga ctcgcggcgg gaatcaaggc acctccacct ctttatgcca
721 gccgtgatgg gattcgttgc cactacaaca tcgatagtgt attatcataa tatcgaaaca
781 tcaaattttc ctaaattact tttaggtttt agccatcatg agagtaaaag ctgctatcaa
841 cattcttaag tattttgtgg ctatatgcat ttatttctcc taggtaaata cctaagagtg
901 aaatctctgg gtcatacaat aagtgggtaa atgttcatat tttaagaaac tgacatcttt
961 tcccaaaatg tttgtatcat tttttatact cactaacaag gtgtaagagt tccagttcca
1021 catgttcatc atttggtgat cttggtctaa tttagtcatg ctagtgggtg tgtactggta
1081 atacattgcg ttttaatttg catttatctg attgctaatt atgttgaaca ctctttgatg
1141 agtttattgg ccatttttaa tctttgggat gtggctattc atatcttttg cccatgtttc
1201 attgggttgc acttttatta ttgcgttgta ggaatatttt gtgcatacta gatattagta
1261 tgtcatcagt tacatgtttt gataatgttt tccttctagt ctgtggcata catattcatt
1321 tatttaatag ggtcttttaa tgagcagaag attttaaatt tcgatgtagt ataatttatc
1381 atttcttcta gtccttagtt actgctttct gtgtcttaag acatctttgt cttccctcta
1441 aatatgtttc cctcttattc tcctgtttgc ttttagatgc tttatggttt ccatttttat
1501 ttttaggact acgattcttt ctaaattaat tgtgtatatg gtgtaagata ggtgtcaaag
1561 ttcttttttt tttttccaag tggatatcaa tgtgttccag caccatttgt gggatagact
1621 ttctgtttct cacgagattg cattggcact tatgtaaaaa aaaataaatc aaatgactat
1681 ttaaatttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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