LOCUS BC033777 2883 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8, mRNA (cDNA clone MGC:44837 IMAGE:4521845), complete cds. ACCESSION BC033777 VERSION BC033777.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2883) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2883) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC033777.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20806094. FEATURES Location/Qualifiers source 1..2883 /db_xref="H-InvDB:HIT000041948" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44837 IMAGE:4521845" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2883 /gene="ALS2CR8" /gene_synonym="CARF" /gene_synonym="FLJ21579" /gene_synonym="NYD-SP24" /db_xref="GeneID:79800" /db_xref="HGNC:HGNC:14435" /db_xref="MIM:607586" CDS 331..2508 /gene="ALS2CR8" /gene_synonym="CARF" /gene_synonym="FLJ21579" /gene_synonym="NYD-SP24" /codon_start=1 /product="amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8" /protein_id="AAH33777.1" /db_xref="GeneID:79800" /db_xref="HGNC:HGNC:14435" /db_xref="MIM:607586" /translation="MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSP TVLPITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQM MIVASPTENGQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVD TLADNTSNYILHPQTSFPLPKKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGD SYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVN AGSRAVVMECQYGPRRKGFQLKKVSEQESRSCQLYKATCPARIYIKKVQKFPEYRVPT DPKIDKKIIRMEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETPCLTLSPS PFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERE LFKPDEVPERHNLSLFPTVNDIKNHIHEVQKSLRNGDTVYNSEIIPATLQWTTDSGNI LKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQ LQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQ NNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQIIDN HSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYKKLSAT" BASE COUNT 952 a 573 c 576 g 782 t ORIGIN 1 gagaaaatgc tgctgtgaag acccaattaa agctttcaca taaatgaagc tacagctatc 61 atgatttagt gcccccaaaa ggaagaactt cagtggacaa gaaaggacat ttctgggggt 121 agtagaatgc ttgaggcctg gaatttaaac ctgagccact atctgaaggt ttaatatatc 181 tttgccaagt ccaagggtac aaagattttc tcctgtgttt tcttctagaa gttttatcat 241 ttgatagtct gtgatccatt tcaagttgat ttgctatctg gtgtgagcta ttaaataata 301 gaagaaaatg gaattgaata tgatgtcagc atggaacaat ctaatgattc attaagagtc 361 aaccataatg acggtgaaga gtcaaaaacc agtgctcaag tatttgagca tctaatctgt 421 atggactcca gggattcttc ctttggacaa aatgattctc ctacagtttt gcccatcact 481 actcgtgaag caaataattc actcatatca cagaatatac cagggcccct gactcagaca 541 cagactcttt ctgcagagca attccatcta gtggaccaaa atgggcaggc tattcaatat 601 gaacttcagt cattggggga atccaatgca caaatgatga tcgttgccag cccaacagaa 661 aatggacagg tacttcgtgt aattccacct acccagacag gaatggcaca agtgattata 721 cctcaggggc aacttgtgga tgtgaatagt cctcgggatg tccctgaaga gaaacccagt 781 aacagaaact taccaactgt aagagtggat actctagcag acaataccag caattacatt 841 cttcatcctc aaacatcctt cccattgccc aaaaagtcag tgaccggaat gctggaagaa 901 ccccttctgg ggcctcttca gccactttct tctaatacac ctatatgggc ctgccgtctt 961 aggagctgtg agaaaattgg agattcatac cgtggctact gtgtaagtga gactgaatta 1021 gaaagtgtcc taacatttca caagcagcaa acacagagtg tttgggggac ccgtcagtct 1081 ccaagcccag ccaagcctgc tacacgcttg atgtggaaat cccagtatgt tccatatgat 1141 ggaatcccat ttgttaatgc agggagtaga gctgtggtaa tggagtgtca gtatgggcca 1201 agaagaaaag gtttccagtt aaaaaaagtc agtgagcagg aaagcaggtc ttgtcagctc 1261 tacaaagcca cttgtccagc tcggatttac attaaaaagg tacagaagtt tcctgaatat 1321 agagttccta cagaccccaa aattgacaag aaaattatca gaatggagca ggagaaagct 1381 tttaacatgc taaagaagaa cttggtagat gctggtggtg ttcttaggtg gtatgtacag 1441 ttacctacac agcaagctca tcagtatcat gaattagaga ctccctgcct cactttgtca 1501 ccttctcctt ttcctgtgtc ttctcttgaa gaagaggaaa ctgcagttag agatgagaat 1561 tgtgcattac cctcacgttt acatcctcaa gtagcacata agattcaaga attagtatca 1621 cagggaatag aacaagtgta tgcagtaagg aaacagctaa gaaaatttgt ggaaagggaa 1681 ctgttcaaac ccgatgaggt acctgaaaga cataatttat ctttgtttcc aactgtaaat 1741 gatataaaaa atcacatcca tgaggtacag aaatccttga gaaatggaga tacggtatat 1801 aactcagaga ttattccagc aacgcttcaa tggactacag acagtgggaa tattctcaaa 1861 gagaccatga cagttacatt tgcagaagga aattcaccag gagaatcaat taccaccaaa 1921 gtggaaacaa atcagaccag gggttctttg tctcctgagc caacccactt gctctcctca 1981 ctctcctcat ttcagcccaa aatatttaca caactacagg gtttgcagtt acaaccaagg 2041 tacacctctc ctgatgaatc accagctgtg gtatcagtaa ataaccagcc gtcctctagt 2101 ccttcaggac ttctggatac aataggaagt gctgtaatga ataataattc tctactgctt 2161 ggtcaaagtc atagccttca aagagataca tgcttaaccc aaaacaatag tactgcctcc 2221 accatgggta accttccaga accagatcaa aatctagttg caatggacga gctggtagaa 2281 gttggagatg ttgaggatac agggaatctg gaaggaactg ttcatcggat tctgttggga 2341 gatgtgcaga ctattccaat acagattata gacaaccact cagctcttat tgaagaaaat 2401 ccagaaagta ccatttctgt gagccaagtt aaacaagaac ccaaagaacc agcattgtct 2461 atggaagcaa aaaaaactgt ggactataag aaattatctg ctacataaat tattgaagct 2521 tttcagaatt tacaactctg gtgacttctg atgtcttaga aaggaaggtg aatatagtca 2581 aagcgtggca ttgagataat tggactgaag accagtttga tgagaagctt ttatttaaaa 2641 ctgatatatt tgttgccagt tccatatttt taccttcctt aagagatgtt ttactcttct 2701 tattttgtat aatttttatg ctctttgatt atctaataag gccagtattt caaaagctgt 2761 tctgaattta tccacagtaa tatagtctga acacaaatag tttacttaac ttatccttgg 2821 aaatattcaa ttttggttat tacaaaacag aaaagaacaa cagcaacaaa aaaaaaaaaa 2881 aaa //