LOCUS BC033721 2693 bp mRNA linear HUM 01-SEP-2008 DEFINITION Homo sapiens SPARC-like 1 (hevin), mRNA (cDNA clone MGC:45264 IMAGE:4939390), complete cds. ACCESSION BC033721 VERSION BC033721.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2693) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2693) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: g Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21359870. FEATURES Location/Qualifiers source 1..2693 /db_xref="H-InvDB:HIT000041919" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45264 IMAGE:4939390" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2693 /gene="SPARCL1" /gene_synonym="PIG33" /gene_synonym="SC1" /db_xref="GeneID:8404" /db_xref="HGNC:HGNC:11220" /db_xref="MIM:606041" CDS 246..2240 /gene="SPARCL1" /gene_synonym="PIG33" /gene_synonym="SC1" /codon_start=1 /product="SPARC-like 1 (hevin)" /protein_id="AAH33721.1" /db_xref="GeneID:8404" /db_xref="HGNC:HGNC:11220" /db_xref="MIM:606041" /translation="MKTGLFFLCLLGTAAAIPTNARLLSDHSKPTAETVAPDNTAIPS LRAEDEENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQED SDGDLSVNLEYAPTEGTLDIKEDMSEPQEKKLSENTDFLAPGVSSFTDSNQQESITKR EENQEQPRNYSHHQLNRSSKHSQGLRDQGNQEQDPNISNGEEEEEKEPGEVGTHNDNQ ERKTELPREHANSKQEEDNTQSDDILEESDQPTQVSKMQEDEFDQGNQEQEDNSNAEM EEENASNVNKHIQETEWQSQEGKTGLEAISNHKETEEKTVSEALLMEPTDDGNTTPRN HGVDDDGDDDGDDGGTDGPRHSASDDYFIPSQAFLEAERAQSIAYHLKIEEQREKVHE NENIGTTEPGEHQEAKKAENSSNEEETSSEGNMRVHAVDSCMSFQCKRGHICKADQQG KPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGA CKSIPTCTDFEVIQFPLRMRDWLKNILMQLYEANSEHAGYLNEKQRNKVKKIYLDEKR LLAGDHPIDLLLRDFKKNYHMYVYPVHWQFSELDQHPMDRVLTHSELAPLRASLVPME HCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLLF" BASE COUNT 932 a 535 c 589 g 637 t ORIGIN 1 ccacgcgtcc gattctcgtc tgtcacttca gacccccact agttgacaga gcagcagaat 61 ttcaactcca gtagacttga atgtgcctct gggcaaagaa gcagagctaa cgaggaaagg 121 gatttaaaga gtttttcttg ggtgtttgtc aaacttttat tccctgtctg tgtgcagagg 181 ggattcaact tcaatttttc tgcagtggct ctgagtccag ccccttactt aaagatctgg 241 aaagcatgaa gactgggctt tttttcctat gtctcttggg aactgcagct gcaatcccga 301 caaatgcaag attattatct gatcattcca aaccaactgc tgaaacggta gcacccgaca 361 acactgcaat ccccagttta agggctgaag atgaagaaaa tgaaaaagaa acagcagtat 421 ccacagaaga cgattcccac cataaggctg aaaaatcatc agtactaaag tcaaaagagg 481 aaagccatga acagtcagca gaacagggca agagttctag ccaagagctg ggattgaagg 541 atcaagagga cagtgatggt gacttaagtg tgaatttgga gtatgcacca actgaaggta 601 cattggacat aaaagaagat atgagtgagc ctcaggagaa aaaactctca gagaacactg 661 attttttggc tcctggtgtt agttccttca cagattctaa ccaacaagaa agtatcacaa 721 agagagagga aaaccaagaa caacctagaa attattcaca tcatcagttg aacaggagca 781 gtaaacatag ccaaggccta agggatcaag gaaaccaaga gcaggatcca aatatttcca 841 atggagaaga ggaagaagaa aaagagccag gtgaagttgg tacccacaat gataaccaag 901 aaagaaagac agaattgccc agggagcatg ctaacagcaa gcaggaggaa gacaataccc 961 aatctgatga tattttggaa gagtctgatc aaccaactca agtaagcaag atgcaggagg 1021 atgaatttga tcagggtaac caagaacaag aagataactc caatgcagaa atggaagagg 1081 aaaatgcatc gaacgtcaat aagcacattc aagaaactga atggcagagt caagagggta 1141 aaactggcct agaagctatc agcaaccaca aagagacaga agaaaagact gtttctgagg 1201 ctctgctcat ggaacctact gatgatggta ataccacgcc cagaaatcat ggagttgatg 1261 atgatggcga tgatgatggc gatgatggcg gcactgatgg ccccaggcac agtgcaagtg 1321 atgactactt catcccaagc caggcctttc tggaggccga gagagctcaa tccattgcct 1381 atcacctcaa aattgaggag caaagagaaa aagtacatga aaatgaaaat ataggtacca 1441 ctgagcctgg agagcaccaa gaggccaaga aagcagagaa ctcatcaaat gaggaggaaa 1501 cgtcaagtga aggcaacatg agggtgcatg ctgtggattc ttgcatgagc ttccagtgta 1561 aaagaggcca catctgtaag gcagaccaac agggaaaacc tcactgtgtc tgccaggatc 1621 cagtgacttg tcctccaaca aaaccccttg atcaagtttg tggcactgac aatcagacct 1681 atgctagttc ctgtcatcta ttcgctacta aatgcagact ggaggggacc aaaaaggggc 1741 atcaactcca gctggattat tttggagcct gcaaatctat tcctacttgt acggactttg 1801 aagtgattca gtttcctcta cggatgagag actggctcaa gaatatcctc atgcagcttt 1861 atgaagccaa ctctgaacac gctggttatc taaatgagaa gcagagaaat aaagtcaaga 1921 aaatttacct ggatgaaaag aggcttttgg ctggggacca tcccattgac cttctcttaa 1981 gggactttaa gaaaaactac cacatgtatg tgtatcctgt gcactggcag tttagtgaac 2041 ttgaccaaca ccctatggat agagtcttga cacattctga acttgctcct ctgcgagcat 2101 ctctggtgcc catggaacac tgcataaccc gtttctttga ggagtgtgac cccaacaagg 2161 ataagcacat caccctgaag gagtggggcc actgctttgg aattaaagaa gaggacatag 2221 atgaaaatct cttgttttga acgaagattt taaagaactc aactttccag catcctcctc 2281 tgttctaacc acttcagaaa tatatgcagc tgtgatactt gtagatttat atttagcaaa 2341 atgttagcat gtatgacaag acaatgagag taattgcttg acaacaacct atgcaccagg 2401 tatttaacat taactttgga aacaaaaatg tacaattaag taaagtcaac atatgcaaaa 2461 tactgtacat tgtgaacaga agtttaattc atagtaattt cactctctgc attgacttat 2521 gagataatta atgattaaac tattaatgat aaaaataatg catttgtatt gttcataata 2581 tcatgtgcac ttcaagaaaa tggaatgcta ctcttttgtg gtttacgtgt attattttca 2641 atatcttaat accctaataa agagtccata aaaatccaaa aaaaaaaaaa aaa //