LOCUS BC033712 4863 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens TBC1 domain family, member 2B, mRNA (cDNA clone
IMAGE:4400762), complete cds.
ACCESSION BC033712
VERSION BC033712.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4863)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4863)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: e Column: 6
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4863
/db_xref="H-InvDB:HIT000041914_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4400762"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4863
/gene="TBC1D2B"
/db_xref="GeneID:23102"
/db_xref="HGNC:HGNC:29183"
CDS 428..1675
/gene="TBC1D2B"
/codon_start=1
/product="TBC1D2B protein"
/protein_id="AAH33712.1"
/db_xref="GeneID:23102"
/db_xref="HGNC:HGNC:29183"
/translation="MKTPVCSEDQGPTREVIAQLLEDALQVESQEQPEQAFVKPHLVS
EYDIYGFRTVPEDDEEEKLVAKVRALDLKTLYLTENQEVSTGVKWENYFASTVNREMM
CSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKALEKQNPASK
QIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYL
EQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDY
TLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSM
SIFKYLRYFTRTILDARKLISISFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIRE
DFLRERDTSPDKGELVSDEEEDT"
BASE COUNT 1095 a 1237 c 1312 g 1219 t
ORIGIN
1 ccacgcgtcc ggccagctgg agaggttcag cttggagaag gagagtcttc agcaggaagt
61 aaggacgctg aagagcaaag tgggcgagct caacgagcag ctgggaatgc tcatggagac
121 catccaagcc aaggacgagg tcatcatcaa gctcagcgag ggcgagggca acgggcctcc
181 tcccaccgtg gcgcccagct ccccttcggt tgtgcctgtt gccagggacc agctggaact
241 ggacaggctg aaagataatc tacaggggta caaaacccaa aacaaatttc taaataagga
301 gattttggaa ctctcagctc tacgaagaaa tgcagaaagg agagagaggg atctgatggc
361 aaagtattct agcctggaag ccaagctctg ccagatagaa agtaaatacc tgatattgct
421 ccaagaaatg aagacaccag tgtgctcaga agaccagggg cccacccggg aggtcatagc
481 ccagttgctg gaggatgctc tgcaggttga gagccaagag cagccggagc aagcatttgt
541 taaacctcat cttgtcagtg aatatgatat ttatgggttc aggactgtac ctgaggatga
601 tgaggaagag aaattggttg ccaaggtccg cgcgttggat ctgaagactc tctacctcac
661 agaaaaccag gaagtctcca ctggggtcaa gtgggaaaac tattttgcaa gtacagtgaa
721 cagggagatg atgtgctctc cagagttaaa aaacctcatc cgtgcgggca ttccccacga
781 gcaccgttcc aaggtgtgga agtggtgtgt ggaccgtcac accaggaagt tcaaggacaa
841 cactgagcct ggccacttcc agaccttgct gcagaaggcg ctggagaaac agaacccagc
901 ctccaagcag attgagctgg acttgctgcg aactctgccc aacaacaaac attactcctg
961 ccccacctca gaaggcatac agaagttacg caatgtcctc ctcgccttct cctggcggaa
1021 tccagatatc ggctactgtc aaggcctaaa caggttggtg gcagtggccc tcctgtacct
1081 ggaacaagaa gatgctttct ggtgtctcgt taccatagtg gaagttttca tgcctcgaga
1141 ctattataca aagactcttt taggatccca ggtggaccag cgggtgttca gagaccttat
1201 gagtgagaag ctgcctcggt tgcatggcca ctttgaacag tacaaagtcg actacactct
1261 catcactttc aactggtttc tggtggtatt tgtggatagt gtcgttagtg acatcctctt
1321 taaaatatgg gactctttcc tttatgaagg accaaaggtt attttccgtt ttgctctggc
1381 actttttaag tacaaggaag aggagatttt gaaattgcaa gattcgatgt ctatatttaa
1441 gtatctccgc tacttcactc gcactatcct tgatgctagg aagctgatca gtatctcctt
1501 tggggacctg aaccctttcc ccctacgcca gatccggaac cgacgcgcct accacttgga
1561 gaaagtccgg ctggagctga ccgagctgga ggccatccgt gaggacttcc tgcgtgagcg
1621 ggacaccagc cctgacaagg gtgagctggt cagtgacgag gaggaggata cctgagtggg
1681 ctcgggatgc tgctcttcct tccttcacaa ccaaagtgtg cccaaagggt gaaagtgcac
1741 ttaaaagcca gaatgtaacg tgtgtgtcct ctggggatct gctgggcaga tgtcccaagc
1801 caggctgccc ttcctcattt cccactgtgc ggggggcagg ggtgggaggt ctaatctgtt
1861 tacaaccatt tccgtgccat gcttttggtt acacgtatct cagtcacgct ttctgcctgg
1921 ttggtggatc ctcaggctta ccagtggcta tttgcaagag cctgtttcca gcctccgtca
1981 gcctgtcggt gctctgaccc tctgaaacct tgctttgctg ggcatctccc catattctct
2041 ctcctgtaca tagtgggcag tggtgtgtgg ttttgaatgg cagtgctata aaggatgcca
2101 gctgtgcttt aggcacctgt aggccagagg gttgctgcct caggcataag gttggtatga
2161 aaaggggctg ccttagaaaa gcaggcacat cccttgttca gaaatggcca ctgtaggaaa
2221 gcctgtgaac ctcccaccag tggctttaag ctgccagcca tgccccattt ctagaatagc
2281 ctttgctctt ccacacgcaa cccttccatc agtgtcttcc agcctgcatg gggagggcct
2341 ggctgcccag acacccaccc tcacttctca tggccagcct gtgtttgcag atcactgggc
2401 tgctctgtcc ccagcttgcc ccgtgccagg catggctctg tgagattctg tggaatgccc
2461 ttcttgactt gtggaaatca ttcaccaagt acgatgggat gggattccaa gtaaacagtg
2521 gaccgtcata ttgcaaagca ggcccacgcc tgggctggcc ttggttgagg ggatggagga
2581 atgttttcgg gggtgctttg cagggcagtg gtgcagccgc agcgtgaacg ctcttggaca
2641 gctgaaaacc atggcctcct tggggatggc cagtgctcct ggtgtctcca cctgcctggg
2701 ttgtgcagga ggccggctgc cagtgcctgg ggctgggaaa cttttttgct tggggcaggc
2761 ttgggtgagc tctcccagat gtgtgcccac cccaccactg cctggaacat ccttgttctc
2821 tgccaggatg caggggcact gttgcctctg acacagcagt ttctgggaac tcagaggact
2881 gcctttctga aggctgggga gaggctttga gcaaggagct tgtttttgct taatcgctct
2941 agaccatccc tgatgcgtag atgtgagagg atgttttctg gcacagtgtt atgaaaatac
3001 aagataaatg atctcagtgg aatgtttcat attacccgaa aaaaactgga aatcatcctt
3061 tgttgtgaac acactgagac taagaattga agcaatgcag ttttaagaag tatttttcct
3121 attttttgct gtcaactttt tggcaatgcc acggcaaagt tggtgtttca gcacatgcta
3181 gagtgagctc cggcttcgtg tctttaacca actccactaa tgtttcactg ggtagacgga
3241 gctggcctct atatttagcc agaagccttt gcctcttttc aggcatcaaa aatgggtttt
3301 gtcattgtct ttgtctttga gagcagcagt ttgaggtctg actccttcag ttgtcctgtg
3361 agctgggcgt tgcagtctgc tcgaatcaag tgttggaaac cccccacccc tcagcccatc
3421 gtgaaacgac agctgtcagc ctggggggcg gctgctgagg aggtgcagca ggaatggggc
3481 tgggccctga ggttttactt tccgagccaa tggcccctgg aacatgccag cacacactgc
3541 catgtcctgg ggctaagagc tgcctttagg gacaggctcg tgttgtccag tttgccctga
3601 gagatgcacc tgaccagggg cccgtcgtgg ctgcaaccca cggtggtatg ttagtgtttc
3661 caggcagttg tcagcagctg ccgggtagtg tgtgtgtgcg acagcaggag agttcctgga
3721 ggaaagggac tggggacact ttctcagagg ttctcctgcc tggaatcaag tgatgcgtgt
3781 ccagaaggca agagagggcg gctccgcctg gttaaagttt gggaacggga cggagccaac
3841 tcctccttcc aggactgtgg gccccactct tttgcgctaa cacttcccct ccctcgggtc
3901 actgaggaaa gagctgctct gtcccctcca gtgccctgaa ggtccctggc ctccactggc
3961 tgccatggca gggggccctt ctgacagggg ctgccccaag ctgctgttcc tcctctgaac
4021 cttcacccca acacccagcc cgtggcccct gcaaggggga ccctgccagc tgggaaaccc
4081 aaaggcctgt ccaaacgtgc gcaccaggac cgaggggagc tccctcccaa cacctgctag
4141 gaattgccaa cttttaaatg gatggggttt tttatgggtt gaacctctgt taatactttt
4201 gtacactctc actacagttt atatttttat aggctatttt ctcaaggtgt ttctagattc
4261 cacatatcta ttttatataa caagttatta tgttatgtgt gtgactccct tgtgtgtatc
4321 tgtgccagcc tcagcctccg agttgctttt ccctctggcc ctgactctca ctgactcacc
4381 gatgtgatgt gcaggcccac ttcttacccc agatagcctc gggcgctgcc tgtagtcatg
4441 ctgacagctg tacagtagcc gccaagactg ctgacagctg gagacggttc tggtttcaac
4501 tacggtatat tgatatcgga agtattctag acagatcctc ggttgggttt tctagctaca
4561 tgtttgtatt gcacagatcc ccacctgcca tcctatagtg ttgtcttcct gtgtgttccg
4621 gggcttctgg gcagctgggc ctgcccgggg aagtccttgc aggtgggagg ccatacagag
4681 acccactgtg tgccactgag cgtcccactg ctgctgggca actggaggac tgcagggggc
4741 gccaggtgac tctctccttt tatatcacag cagctcctgt gctgaccttc aagttacgtt
4801 ttggaactgt aatactaaag gaagaaataa actactaatt tgtataataa aaaaaaaaaa
4861 aaa
//