LOCUS BC033696 1938 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens hippocampus abundant transcript 1, mRNA (cDNA clone
IMAGE:3446672), with apparent retained intron.
ACCESSION BC033696
VERSION BC033696.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1938)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1938)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: a Column: 2
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1938
/db_xref="H-InvDB:HIT000093188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3446672"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 620 a 344 c 339 g 635 t
ORIGIN
1 ccacgcgtcc gctcctacct accggaggca ggccaatatt ccagcttttt tttatacctc
61 agacagataa tgaaattttc accagaaagt gttgcagcgt ttatagcagt ccttggcatt
121 ctttccatta ttgcacagac catagtcttg agtttactta tgaggtcaat tggaaataag
181 aacaccattt tactgggtct aggatttcaa atattacagt tggcatggta tggctttggt
241 tcagaacctt ggatgatgtg ggctgctggg gcagtagcag ccatgtctag catcaccttt
301 cctgctgtca gtgcacttgt ttcacgaact gctgatgctg atcaacaggg tgtcgttcaa
361 ggaatgataa caggaattcg aggattatgc aatggtctgg gaccggccct ctatggattc
421 attttctaca tattccatgt ggaacttaaa gaactgccaa taacaggaac agacttggga
481 acaaacacaa gccctcagca ccactttgaa cagaattcca tcatccctgg ccctcccttc
541 ctatttggag cctgttcagt actgctggct ctgcttgttg ccttgtttat tccggaacat
601 accaatttaa gcttaaggtc cagcagttgg agaaagcact gtggcagtca cagccatcct
661 cataatacac aagcgccagg agaggccaaa gaacctttac tccaggacac aaatgtgtga
721 cgactgaaat caggaagatt tttctatcag cacccaggtc ttagttttca cctctagttc
781 tggatgtaca ttccatttcc atccacagtg tactttaaga ttgtcttaag aaatgtatct
841 gcatgaactc cgtgggaact aaaggaagtg ggaacttaga accagacagt tttccaaaga
901 tgttacaatt tcttttgaaa aaccttttgt ttattagcac caatttcttg ccactaagct
961 atttgtttta ttatacatcc tttaattaaa aactatatat gtaacttctt agatattagc
1021 aaatgtctct gctaccattt ccttaaggtg ttgagcttta actctatgct gactcagtga
1081 gacacagtag gtagtatggt tgtggaccta tttgttttaa cattgtaaaa ttttgagtca
1141 gattttaata ttgtaaaatc ttgggtcaaa taattcaaag ccttaatgca gatgcactaa
1201 aacaaagaaa tggtaaatga attgtttgca tttaaaaaaa aaaactctta agaaaactgt
1261 actaaatctg aatcatgttt tgagcttgtt tgcagtactt ttaaacatta ttcactactg
1321 tttttgaagt gagaaagtat cagccattta gcatttaagt tggggtattt agagcctgta
1381 atctaaatgc tggctcaaat ttattcccca gctacttctt ataccactat tcttttaatg
1441 tttgcataat cataagcacc tcaacacttg aatacataat ctaaaaatta tatagtaaag
1501 ctggtagcct tgaaaatgtc agtgtgatat ctattatgta gataaatata tatagtggcc
1561 tttcaggact gtcacagtaa cactttattt acagagctaa tgtttgtcct aaattttcag
1621 gaccctagag gagagcttta tacaattacc gatgtgaatt tctctaaagt gtatattttt
1681 gtgtccagtt atattattta aaaaagtgtt actttgtaaa aattgtatat aaagtactgt
1741 atagtttaca ctgttttcat cttgtgtgtg gttattgctt aatgcttttt aaacttggaa
1801 cactcactat ggttaaataa ggtcttaaaa gaaatgtaaa tattctgtta ataaagttaa
1861 atattttaat gatttttttt ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaa
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