LOCUS BC033585 1680 bp mRNA linear HUM 22-APR-2003
DEFINITION Homo sapiens nodal homolog (mouse), mRNA (cDNA clone
IMAGE:5239967), partial cds.
ACCESSION BC033585
VERSION BC033585.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1680)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1680)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1680
/db_xref="H-InvDB:HIT000093155"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5239967"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1680
/gene="NODAL"
/db_xref="GeneID:4838"
/db_xref="MIM:601265"
CDS <1..980
/gene="NODAL"
/codon_start=3
/product="NODAL protein"
/protein_id="AAH33585.1"
/db_xref="GeneID:4838"
/db_xref="MIM:601265"
/translation="TVATALLRTRGQPSSPSPLAYMLSLYRDPLPRADIIRSLQAEDV
AVDGQNWTFAFDFSFLSQQEDLAWAELRLQLSSPVDLPTEGSLAIEIFHQPKPDTEQA
SDSCLERFQMDLFTVTLSQVTFSLGSMVLEVTRPLSKWLKRPGALEKQMSRVAGECWP
RPPTPPATNVLLMLYSNLSQEQRQLGGSTLLWEAESSWRAQEGQLSWEWGKRHRRHHL
PDRSQLCRKVKFQVDFNLIGWGSWIIYPKQYNAYRCEGECPNPVGEEFHPTNHAYIQS
LLKRYQPHRVPSTCCAPVKTKPLSMLYVDNGRVLLDHHKDMIVEECGCL"
BASE COUNT 444 a 423 c 460 g 353 t
ORIGIN
1 cgacggtggc cactgcgctc ctgcgtacgc gggggcagcc ctcgtcgcca tcccctctgg
61 cgtacatgct gagcctctac cgcgacccgc tgccgagggc agacatcatc cgcagcctac
121 aggcagaaga tgtggcagtg gatgggcaga actggacgtt tgcttttgac ttctccttcc
181 tgagccaaca agaggatctg gcatgggctg agctccggct gcagctgtcc agccctgtgg
241 acctccccac tgagggctca cttgccattg agattttcca ccagccaaag cccgacacag
301 agcaggcttc agacagctgc ttagagcggt ttcagatgga cctattcact gtcactttgt
361 cccaggtcac cttttccttg ggcagcatgg ttttggaggt gaccaggcct ctctccaagt
421 ggctgaagcg ccctggggcc ctggagaagc agatgtccag ggtagctgga gagtgctggc
481 cgcggccccc cacaccgcct gccaccaatg tgctccttat gctctactcc aacctctcgc
541 aggagcagag gcagctgggt gggtccacct tgctgtggga agccgagagc tcctggcggg
601 cccaggaggg acagctgtcc tgggagtggg gcaagaggca ccgtcgacat cacttgccag
661 acagaagtca actgtgtcgg aaggtcaagt tccaggtgga cttcaacctg atcggatggg
721 gctcctggat catctacccc aagcagtaca acgcctatcg ctgtgagggc gagtgtccta
781 atcctgttgg ggaggagttt catccgacca accatgcata catccagagt ctgctgaaac
841 gttaccagcc ccaccgagtc ccttccactt gttgtgcccc agtgaagacc aagccgctga
901 gcatgctgta tgtggataat ggcagagtgc tcctagatca ccataaagac atgatcgtgg
961 aagaatgtgg gtgcctctga tgacatcctg gagggagact ggatttgcct gcactctgga
1021 aggctgggaa actcctggaa gacatgataa ccatctaatc cagtaaggag aaacagagag
1081 gggcaaagtt gctctgccca ccagaactga agaggagggg ctgcccactc tgtaaatgaa
1141 gggctcagtg gagtctggcc aagcacagag gctgctgtca ggaagaggga ggaagaagcc
1201 tgtgcagggg gctggctgga tgttctcttt actgaaaaga cagtggcaag gaaaagcaca
1261 agtgcatgag ttctttactg gattttttaa aaacctgtga accccccgaa actgtatgtg
1321 aaagttgaga catatgtgca tgtattttgg aggtgggatg aagtcaccta tagctttcat
1381 gtattctcca aagtagtctg tgtgtgacct gtccccctcc ccaaagatta aggatcactg
1441 tatagattaa aaagagtccg tcaatctcat tgcctcaggc tgggttgggg gagccccaca
1501 gctttctggc tggccagtgg caatctactg gccttgtcca gaggctcact ggagtggttc
1561 tctgctaatg agctgtacaa caataaagcc attgtctagt taaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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