LOCUS BC033584 1923 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) receptor 6, mRNA (cDNA clone
MGC:34420 IMAGE:5225727), complete cds.
ACCESSION BC033584
VERSION BC033584.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1923)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1923)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5730105.
FEATURES Location/Qualifiers
source 1..1923
/db_xref="H-InvDB:HIT000041859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34420 IMAGE:5225727"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1923
/gene="CXCR6"
/gene_synonym="BONZO"
/gene_synonym="CD186"
/gene_synonym="STRL33"
/gene_synonym="TYMSTR"
/db_xref="GeneID:10663"
/db_xref="HGNC:HGNC:16647"
/db_xref="MIM:605163"
CDS 33..1061
/gene="CXCR6"
/gene_synonym="BONZO"
/gene_synonym="CD186"
/gene_synonym="STRL33"
/gene_synonym="TYMSTR"
/codon_start=1
/product="chemokine (C-X-C motif) receptor 6"
/protein_id="AAH33584.1"
/db_xref="GeneID:10663"
/db_xref="HGNC:HGNC:16647"
/db_xref="MIM:605163"
/translation="MAEHDYHEDYGFSSFNDSSQEEHQDFLQFSKVFLPCMYLVVFVC
GLVGNSLVLVISIFYHKLQSLTDVFLVNLPLADLVFVCTLPFWAYAGIHEWVFGQVMC
KSLLGIYTINFYTSMLILTCITVDRFIVVVKATKAYNQQAKRMTWGKVTSLLIWVISL
LVSLPQIIYGNVFNLDKLICGYHDEAISTVVLATQMTLGFFLPLLTMIVCYSVIIKTL
LHAGGFQKHRSLKIIFLVMAVFLLTQMPFNLMKFIRSTHWEYYAMTSFHYTIMVTEAI
AYLRACLNPVLYAFVSLKFRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNV
EATSMFQL"
BASE COUNT 499 a 453 c 444 g 527 t
ORIGIN
1 catctctgct ggtgttcatc agaacagaca ccatggcaga gcatgattac catgaagact
61 atgggttcag cagtttcaat gacagcagcc aggaggagca tcaagacttc ctgcagttca
121 gcaaggtctt tctgccctgc atgtacctgg tggtgtttgt ctgtggtctg gtggggaact
181 ctctggtgct ggtcatatcc atcttctacc ataagttgca gagcctgacg gatgtgttcc
241 tggtgaacct acccctggct gacctggtgt ttgtctgcac tctgcccttc tgggcctatg
301 caggcatcca tgaatgggtg tttggccagg tcatgtgcaa gagcctactg ggcatctaca
361 ctattaactt ctacacgtcc atgctcatcc tcacctgcat cactgtggat cgtttcattg
421 tagtggttaa ggccaccaag gcctacaacc agcaagccaa gaggatgacc tggggcaagg
481 tcaccagctt gctcatctgg gtgatatccc tgctggtttc cttgccccaa attatctatg
541 gcaatgtctt taatctcgac aagctcatat gtggttacca tgacgaggca atttccactg
601 tggttcttgc cacccagatg acactggggt tcttcttgcc actgctcacc atgattgtct
661 gctattcagt cataatcaaa acactgcttc atgctggagg cttccagaag cacagatctc
721 taaagatcat cttcctggtg atggctgtgt tcctgctgac ccagatgccc ttcaacctca
781 tgaagttcat ccgcagcaca cactgggaat actatgccat gaccagcttt cactacacca
841 tcatggtgac agaggccatc gcatacctga gggcctgcct taaccctgtg ctctatgcct
901 ttgtcagcct gaagtttcga aagaacttct ggaaacttgt gaaggacatt ggttgcctcc
961 cttaccttgg ggtctcacat caatggaaat cttctgagga caattccaag actttttctg
1021 cctcccacaa tgtggaggcc accagcatgt tccagttata ggccttgcca gggtttcgag
1081 aagctgctct ggaatttgca aggcatggct gtgccctctt gatgtggtga ggcaggcttt
1141 gtttatagct tgcgcattct catggagaag ttatcagaca ctctggctgg tttggaatgc
1201 ttcttctcag gcatgaacat gtactgttct cttcttgaac actcatgctg aaagcccaag
1261 tagggggtct aaaattttta aggactttcc ttcctccatc tccaagaatg ctgaaaccaa
1321 gggggatgac atgtgactcc tatgatctca ggttctcctt gattgggact ggggctgaag
1381 gttgaagagg tgagcacggc caacaaagct gttgatggta ggtggcacac tgggtgccca
1441 agctcagaag gctcttctga ctactgggca aagagtgtag atcagagcag cagtgaaaac
1501 aagtgctggc accaccaggc acctcacaga aatgagatca ggctctgcct caccttgggg
1561 cttgactttt gtataggtag atgttcagat tgctttgatt aatccagaat aactagcacc
1621 agggactatg aatgggcaaa actgaattat aagaggctga taattccagt ggtccatgga
1681 atgcttgaaa aatgtgcaaa acagcgttta agactgtaat gaatctaagc agcatttctg
1741 aagtggactc tttggtggct ttgcatttta aaaatgaaat tttccaatgt ctgccacaca
1801 aacgtatgta aatgtatata cccacacaca tacacacata tgtcatatat tactagcata
1861 tgaatttcat agctaagaaa taaaactgtt aaagtctcaa aaaaaaaaaa aaaaaaaaaa
1921 aaa
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