LOCUS BC033549 5308 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:4826963, containing frame-shift
errors.
ACCESSION BC033549
VERSION BC033549.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5308)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5308)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39753960
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5308
/db_xref="H-InvDB:HIT000093135"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4826963"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1270 a 1503 c 1480 g 1055 t
ORIGIN
1 gtcctgtctg gcggtgccga cggtgagggg cggtggccca acggcgggag attcaaacct
61 ggaagaagga ggaacatgga gaggagagca gcgggcccag gctgggcagc ctctggatcg
121 aggcctgcct gaaggaggag cttccttccc cggtggagct ggaggagagc cttcggaatg
181 gagtgctgct ggccaagctg ggccactgtt ttgcaccctc cgtggttccg ttgaagaaga
241 tctacgatgt ggagcagctg cggtaccagg caactggctt acatttccgt cacacagaca
301 acatcaactt ttggctatct gcaatagccc acatcggtct gccttcgacc ttcttcccag
361 agaccacgga catctatgac aaaaagaaca tgccccgggt agtctactgc atccatgctc
421 tcagtctctt cctcttccgg ctgggattgg cccctcagat acatgatcta tacgggaaag
481 tgaaattcac agctgaggaa ctcagcaaca tggcgtccga actggccaaa tatggcctcc
541 agctgcctgc cttcagcaag atcgggggca tcttggccaa tgagctctcg gtggatgagg
601 ctgcagtcca tgcagctgtt cttgccatca atgaagcagt ggagcgaggg gtggtggagg
661 acaccctggc tgccttgcag aatcccagtg ctcttctgga gaatctccga gagcctctgg
721 cagccgtcta ccaggagatg ctggcccagg ccaagatgga gaaggcagcc aatgccagga
781 accatgatga cagagaaagc caggacatct atgaccacta cctaactcag gctgaaatcc
841 agggcaatat caaccatgtc aacgtccatg gggctctaga agttgttgat gatgccctgg
901 aaagacagag ccctgaagcc ttgctcaagg cccttcaaga ccctgccctg gccctgcgag
961 gggtgaggag agactttgct gactggtacc tggagcagct gaactcagac agagagcaga
1021 aggcacagga gctgggcctg gtggagcttc tggaaaagga ggaagtccag gctggtgtgg
1081 ctgcagccaa cacaaagggt gatcaggaac aagccatgct ccacgctgtg cagcggatca
1141 acaaagccat ccggagggga gtggcggctg acactgtgaa ggagctgatg tgccctgagg
1201 cccagctgcc tccagtgtac cctgttgcat cgtctatgta ccagctggag ctggcagtgc
1261 tccagcagca gcagggggag cttggccagg aggagctctt cgtggctgtg gagatgctct
1321 cagctgtggt cctgattaac cgggccctgg aggcccggga tgccagtggc ttctggagca
1381 gcctggtgaa ccctgccaca ggcctggctg aggtggaagg agaaaatgcc cagcgttact
1441 tcgatgccct gctgaaattg cgacaggagc gtgggatggg tgaggacttc ctgagctgga
1501 atgacctgca ggccaccgtg agccaggtca atgcacagac ccaggaagag actgaccggg
1561 tccttgcagt cagcctcatc aatgaggctc tggacaaagg cagccctgag aagactctgt
1621 ctgccctact gcttcctgca gctggcctag atgatgtcag cctccctgtc gcccctcggt
1681 accatctcct ccttgtggca gccaaaaggc agaaggcccg gtgacagggg atcctggagc
1741 tgtgctgtgg cttgaggaga tccgccaggg agtggtcaga gccaaccagg acactaatac
1801 agctcagaga atggctcttg gtgtggctgc catcaatcaa gccatcaagg agggcaaggc
1861 agcccagact gagcgggtgt tgaggaaccc cgcagtggcc cttcgagggg tagttcccga
1921 ctgtgccaac ggctaccagc gagccctgga aagtgccatg gcaaagaaac agcgtccagc
1981 agacacagct ttctgggttc aacatgacat gaaggatggc actgcctact acttccatct
2041 gcagaccttc caggggatct gggagcaacc tcctggctgc cccctcaaca cctctcacct
2101 gacccgggag gagatccagt cagctgtcac caaggtcact gctgcctatg accgccaaca
2161 gctctggaaa gccaacgtcg gctttgttat ccagctccag gcccgcctcc gtggcttcct
2221 agttcggcag aagtttgctg agcattccca ctttctgagg acctggctcc cagcagtcat
2281 caagatccag gctcattggc ggggttatag gcagcggaag atttacctgg agtggttgca
2341 gtattttaaa gcaaacctgg atgccataat caagatccag gcctgggccc ggatgtgggc
2401 agctcggagg caatacctga ggcgtctgca ctacttccag aagaatgtta actccattgt
2461 gaagatccag gcatttttcc gagccaggaa agcccaagat gactacagga tattagtgca
2521 tgcaccccac cctcctctca gtgtggtacg cagatttgcc catctcttga atcaaagcca
2581 gcaagacttc ttggctgagg cagagctgct gaagctccag gaagaggtag ttaggaagat
2641 ccgatccaat cagcagctgg agcaggacct caacatcatg gacatcaaga ttggcctgct
2701 ggtgaagaac cggatcactc tgcaggaagt ggtctcccac tgcaagaagc tgaccaagag
2761 gaataaggaa cagctgtcag atatgatggt tctggacaag cagaagggtt taaagtcgct
2821 gagcaaagag aaacggcaga aactagaagc ataccaacac ctcttctacc tgctccagac
2881 tcagcccatc tacctggcca agctgatctt tcagatgcca cagaacaaaa ccaccaagtt
2941 catggaggca gtgattttca gcctgtacaa ctatgcctcc agccgccgag aggcctatct
3001 cctgctccag ctgttcaaga cagcactcca ggaggaaatc aagtcaaagg tggagcagcc
3061 ccaggacgtg gtgacaggca acccaacagt ggtgaggctg gtggtgagat tctaccgtaa
3121 tgggcgggga cagagtgccc tgcaggagat tctgggcaag gttatccagg atgtgctaga
3181 agacaaagtg ctcagcgtcc acacagaccc tgtccacctc tataagaact ggatcaacca
3241 gactgaggcc cagacagggc agcgcagcca tctcccatat gatgtcaccc cggagcaggc
3301 cttgagccac cccgaggtcc agagacgact ggacatcgcc ctacgcaacc tcctcgccat
3361 gactgataag ttccttttag ccatcacctc atctgtggac caaattccgt atgggatgcg
3421 atatgtggcc aaagtcctga aggcaactct ggcagagaaa ttccctgacg ccacagacag
3481 cgaggtctat aaggtggtcg ggaacctcct gtactaccgc ttcctgaacc cagctgtggt
3541 ggctcctgac gccttcgaca ttgtggccat ggcagctggt ggagccctgg ctgcccccca
3601 gcgccatgcc ctgggggctg tggctcagct cctacagcac gctgcggctg gcaaggcctt
3661 ctctgggcag agccagcacc tacgggtcct gaatgactat ctggaggaaa cacacctcaa
3721 gttcaggaag ttcatccata gagcctgcca ggtgccagag ccagaggagc gttttgcagt
3781 ggacgagtac tcagacatgg tggctgtggc caaacccatg gtgtacatca ccgtggggga
3841 gctggtcaac acgcacaggc tgttgctgga gcaccaggac tgcattgccc ctgatcacca
3901 agaccccctg catgagctcc tggaggatct tggggagctg cccaccatcc ctgaccttat
3961 tggtgagagc atcgctgcag atgggcacac agacctgagc aagctagaag tgtccctgac
4021 gctgaccaac aagtttgaag gactagaggc agatgctgat gactccaaca cccgtagcct
4081 gcttctgagc accaagcagc tgttggccga tatcatacag ttccatcctg gggacaccct
4141 caaggagatc ctgtccctct cggcttccag agagcaagaa gcagcccaca agcagctgat
4201 gagccgacgc caggcctgta cagcccagac accggagcca ctgcgacgac accgctcact
4261 gacagctcac tccctcctgc cactggcaga gaagcagcgg cgcgtcctgc ggaacctgcg
4321 ccgacttgaa gccctggggt tggtcagcgc cagaaatggc taccaggggc tagtggacga
4381 gctggccaag gacatccgca accagcacag acacaggcac aggcggaagg cagagctggt
4441 gaagctgcag gccacattac agggcctgag cactaagacc accttctatg aggagcaggg
4501 tgactactac agccagtaca tccgggcctg cctggaccac ctggcccccg actccaagag
4561 ttctgggaag gggaagaagc agccttctct tcattacact gctgctcagc tcctggaaaa
4621 gggtgtcttg gtggaaattg aagatcttcc cgcctctcac ttcagaaacg tcatctttga
4681 catcacgccg ggagatgagg caggaaagtt tgaagtaaat gccaagttcc tgggtgtgga
4741 catggagcga tttcagcttc actatcagga tctcctgcag ctccagtatg agggtgtggc
4801 tgtcatgaaa ctcttcaaca aggccaaagt caatgtcaac cttctcatct tcctcctcaa
4861 caagaagttt ttgcggaagt gacagaggca aagggtgcta cccaagcccc tcttacctct
4921 ctggatgctt tctttaacac taactcacca ctgtgcttcc ctgcagacac ccagagctca
4981 ggactgggca aggcccaggg attctcaccc cttccccagc tgggaggagc ttgcctgcct
5041 ggccacagac agtgtatctt ctaattggct aaagtgggcc ttgcccagag tccagctgtg
5101 tggcttttat catgcatgac aaacccctgg ctttcctgcc agatggattc tcatccctta
5161 cagctgactc ttccaggcaa tttccataga tctgcagtcc tgcctctgcc acagtctctc
5221 tgttgtcccc acatctaccc aacttcctgt actgttgccc ttctgatgtt aataaaagca
5281 gctgttactc ccaaaaaaaa aaaaaaaa
//