LOCUS BC033537 3784 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens vesicle amine transport protein 1 homolog (T.
californica)-like, mRNA (cDNA clone MGC:42386 IMAGE:4821265),
complete cds.
ACCESSION BC033537
VERSION BC033537.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3784)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3784)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308256.
FEATURES Location/Qualifiers
source 1..3784
/db_xref="H-InvDB:HIT000051137"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42386 IMAGE:4821265"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3784
/gene="VAT1L"
/db_xref="GeneID:57687"
/db_xref="HGNC:HGNC:29315"
CDS 98..1357
/gene="VAT1L"
/codon_start=1
/product="vesicle amine transport protein 1 homolog (T.
californica)-like"
/protein_id="AAH33537.1"
/db_xref="GeneID:57687"
/db_xref="HGNC:HGNC:29315"
/translation="MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRA
VVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP
GFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAA
FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH
EAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYG
SSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGV
VEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPTPLMANDS
TETSEAGEEEEDHEGDSENKERMPFIQ"
BASE COUNT 1018 a 899 c 911 g 956 t
ORIGIN
1 attcaacagg aggaacccgc gggagaggag ccccactccc ccagcgccgc agccaccgca
61 gccaccgcag cccgtgcgcc ccgcgccctc gagcgccatg gccaaggaag gcgtggagaa
121 ggcggaggag acggagcaaa tgatcgagaa ggaggcaggc aaggagccgg cggagggcgg
181 cggcggcgac ggctcgcacc gcctcgggga cgcccaggag atgcgcgcgg tggtgctggc
241 tggcttcggg gggctcaaca agctgcggct cttcaggaag gccatgcccg agcctcagga
301 cggcgagctc aagatccgcg tcaaagcctg tggattaaac ttcattgact tgatggtgcg
361 acaagggaat attgacaacc ctcccaagac tcccctggtg ccaggatttg agtgttctgg
421 gattgttgaa gctctggggg acagcgtgaa aggatatgag attggagacc gtgtcatggc
481 atttgtcaat tacaatgcct gggcagaggt ggtctgcaca ccagtggagt ttgtctacaa
541 gatcccggat gacatgagct tctcggaggc tgctgcattc cccatgaact tcgtcacagc
601 ctatgtgatg ctgtttgaag ttgccaacct ccgggaaggg atgtctgtgc tcgtgcactc
661 agctggtggg ggcgtgggtc aagctgtggc tcagctgtgt tccactgtcc ccaacgtgac
721 tgtctttgga acagcctcta ctttcaagca tgaagcaatc aaagactctg tgacccacct
781 ctttgacaga aatgcagact acgtgcaaga agttaaaaga atctctgctg aaggtgtgga
841 catcgttttg gattgcctct gtggggacaa cactggaaaa ggtctcagtc ttctcaaacc
901 cctgggaacc tacattttat atggctcatc caacatggta actggagaga ccaagagctt
961 cttcagcttt gcaaaatcat ggtggcaggt ggagaaggtg aaccccatca agctgtatga
1021 ggagaacaaa gtcatcgcgg ggttttccct tttaaatctg ctcttcaaac aaggccgggc
1081 gggcctcatt cggggagtgg tggaaaaact catagggctc tacaaccaga agaagatcaa
1141 gcctgtggtg gactccttgt gggctctgga ggaggtgaag gaggccatgc agcggattca
1201 cgaccgaggg aacattggca agttaattct ggatgtagaa aagaccccaa ctccactgat
1261 ggccaatgac agcacagaga ccagtgaagc aggggaagag gaggaggacc acgagggaga
1321 cagcgagaac aaggagcgga tgccctttat ccagtaactg aggacccagg tgggagaatg
1381 tgaaggatgg tttggaagat gaggacccgg ctgagaaaac tcttctgtgc cccagtgaac
1441 aaatgctgta gtccagtgcg tgtcgtgttt gtctgcagtc agctgagcta aaaagctgtt
1501 gatcactgtt gttttttgaa gtgccaatcc catgccatgc agtattatgt ccctctccta
1561 tctgtgtatt acacattccc ctctcccctg tatcaaaacc atccatctgt gggttcttct
1621 tgacagttct agaacagcct tgcaaattaa tacaagtccc aggcccaatg cctaagagac
1681 cagacgtggg caaagacaag tttggatgga aaggtgttat cacagagccc tgtccagctc
1741 ctagaattcc tcaggccagt gacacttttt tgctgctggc cacccatgcc tctgatgaga
1801 acacttgcca atttggccag cagaaagaga gtaggccgga tgttttcatg agcccacaaa
1861 tttagaaact ctcctagtag tactttttct ctctccattt aagagacaac tacggtcaaa
1921 agtttgagcc attctcttct accccttcag tgtctgaccc tttcactggc tcttatctgt
1981 aaacacaggg aggcaggtat ggatttttca cagtagacaa tgggtcaaca gcatgagttt
2041 gaggacctgc tgtgaagatt tctcctccaa aatacatctc atgggcagga ttcttcctgc
2101 tccatatctg tttcaatttt aagaaagcac cacatacaag acacattcag aagtcattcc
2161 tgagcattgc tggtgtttgc acacttgcca cctgcattac caattctgta aatttcaatt
2221 cctggtggaa agtgaccact ttgaccatgg atttcccaaa gaagagttcc tttgcagacc
2281 ataggtggaa aagtcaatga gcatctcctt ccttgccaaa gcatgtccca acatgtaaca
2341 aactctaggg atacaaaagg tttatattca gcatctgatg tcagatgtac agttcctccc
2401 ctcccatata taaaccccgg tgtagaatct gcagcgccct gctcttcgga aaccaaggaa
2461 caagccacct gctcacacac cttgttcaac ttttcagctc ctaaggaacc ccacccccat
2521 gcaatttgac tgtgcttgag aggtgaatac agttaccttc gagaaacaga gggagctcct
2581 caccccgtcc ttccagtcct tttggctaaa atgcttaact atcactcaca aacaaatgtg
2641 gagataccag gagctcattt gattcatacc ccaactttgt gttctgaaaa acatcagagg
2701 gattttacat tgcccagttt ctccaccaac aagccttagg gtggacccaa ccctttccgc
2761 aagtggtagg aacgaatgca tcttagcaat tacctgattt ccaaagtcct tttgtagcaa
2821 atgtcacctc attcgtggtc tttttaccta tcctaagctt atgatgatga gttatgtatg
2881 ccaaatattt atctgaagag tttctcctca ttgtgaatgt gtatgtaaaa tatgaagaca
2941 agaaagggtg ctttcatctg aggaaccaag gggtgagagt atcccaaagg aggacaccag
3001 catcatcttt tcttcgtact ccaggaccca ccaatattcc agttctgggt catttagaga
3061 gataatgggg cgtttattcc cctattacct ttgctaagtg ctatattatt ggctgtttct
3121 cccgtaacca tgctgaaaag ggggtcttag ggagaactgt catccaagtg gcattcctag
3181 taagttgggt agaaatgaca ttttccagag ctgaaggagt gaagagccct tggccatact
3241 agggctctcc ttcccccggg gagtgggaat tcagccacat tcagaattca catcgccttt
3301 gttatgtcca gaggagaggc ataaaaaggc actctccccc accaccccta ccgaatctgg
3361 gtttggtttg gttttattta actagcaaag ttaatccagt aatcgcaaat tactccagat
3421 ggttaaagaa aaccctttca gaatacagaa cgagaaaact agagtttgac caataagacc
3481 aatttctgcc atgaagaacc gggggacgca agttaattgt ttaacgtact ctcattttaa
3541 gcaccttctt tcctgtctct tgattgtttt ttctgaagga agtgtaaaga atgtctcagt
3601 ctgccttaaa ggaactgtga aggcttctct gtaatttaag cttgattgaa gtgaactgaa
3661 acattgtcta atgtctttgt ggctttagag cttttgttat attgtgccta taaagcaaat
3721 tatgtttaca taaaaatata aataaagtat tcagcatagc aaaaccccaa aaaaaaaaaa
3781 aaaa
//