LOCUS BC033527 1710 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens myosin VB, mRNA (cDNA clone IMAGE:5162990), complete
cds.
ACCESSION BC033527
VERSION BC033527.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1710)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1710)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: i Column: 4
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1710
/db_xref="H-InvDB:HIT000093119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5162990"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1710
/gene="MYO5B"
/db_xref="GeneID:4645"
/db_xref="HGNC:HGNC:7603"
/db_xref="MIM:606540"
CDS 217..1473
/gene="MYO5B"
/codon_start=1
/product="MYO5B protein"
/protein_id="AAH33527.1"
/db_xref="GeneID:4645"
/db_xref="HGNC:HGNC:7603"
/db_xref="MIM:606540"
/translation="MKKAQDLEAAQALAQSERKRHELNRQVTVQRKEKDFQGMLEYHK
EDEALLIRNLVTDLKPQMLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLTSTINGI
KKVLKKHNDDFEMTSFWLSNTCRLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEY
RQVLSDLSIQIYQQLIKIAEGVLQPMIVSAMLENESIQGLSGVKPTGYRKRSSSMADG
DNSYCLEAIIRQMNAFHTVMCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDVCSW
STGMQLRYNISQLEEWLRGRNLHQSGAVQTMEPLIQAAQLLQLKKKTQEDAEAICSLC
TSLSTQQIVKILNLYTPLNEFEERVTVAFIRTIQAQLQERNDPQQLLLDAKHMFPVLF
PFNPSSLTMDSIHIPACLNLEFLNEV"
BASE COUNT 501 a 439 c 385 g 385 t
ORIGIN
1 cagctctcct ggcagcgtcc ctgactggcg catttctgac ggctgcccac gggccgcact
61 ggtcacctcc aactgcaagc aggattttac ccccaccatc ccaggccggg ctgatgtctg
121 ttctcacact gcttcctctg cttccaggac cttaaagaac tggtagaaaa gctggaaaag
181 aatgagagga agctcaaaaa gcaactgaag atttacatga agaaagccca ggacctagaa
241 gctgcccagg cattggccca gagtgagagg aagcgccatg agctcaacag gcaggtcacg
301 gtccagcgga aagagaagga tttccagggc atgctggagt accacaaaga ggacgaggcc
361 ctcctcatcc ggaacctggt gacagacttg aagccccaga tgctgtcggg cacagtgccc
421 tgtctccccg cctacatcct ctacatgtgc atccggcacg cggactacac caacgacgat
481 ctcaaggtgc actccctgct gacctccacc atcaacggca ttaagaaagt cctgaaaaag
541 cacaatgatg actttgagat gacgtcattc tggttatcca acacctgccg ccttcttcac
601 tgtctgaagc agtacagcgg ggatgagggc ttcatgactc agaacactgc aaagcagaat
661 gaacactgtc ttaagaattt tgacctcacc gaataccgtc aggtgctgag tgacctttcc
721 attcagatct accagcagct cattaaaatt gccgagggcg tgttacagcc gatgatagtt
781 tctgccatgt tggaaaatga gagcattcag ggtctatctg gtgtgaagcc caccggctac
841 cggaagcgct cctccagcat ggcagatggg gataactcat actgcctgga agctatcatc
901 cgccagatga atgcctttca tacagtcatg tgtgaccagg gcttggaccc tgagatcatc
961 ctgcaggtat tcaaacagct cttctacatg atcaacgcag tgactcttaa caacctgctc
1021 ttgcggaagg acgtctgctc ttggagcaca ggcatgcaac tcaggtacaa tataagtcag
1081 cttgaggagt ggcttcgggg aagaaacctt caccagagtg gagcagttca gaccatggaa
1141 cctctgatcc aagcagccca gctcctgcaa ttaaagaaga aaacccagga ggacgcagag
1201 gctatctgct ccctgtgtac ctccctcagc acccagcaga ttgtcaaaat tttaaacctt
1261 tatactcccc tgaatgaatt tgaagaacgg gtaacagtgg cctttatacg aacaatccag
1321 gcacaactac aagagcggaa tgaccctcag caactgctat tagatgccaa gcacatgttt
1381 cctgttttgt ttccatttaa tccatcttct ctaaccatgg actcaatcca catcccagcg
1441 tgtctcaatc tggaattcct caatgaagtc tgaagatgca tgtttccagc attagtttga
1501 ttcccaatgt gagcaagaag gaagtatata cagtaaagta aattcaagga tctgttaaat
1561 ctggtaaaag tagatcaaat cagagattga cagcctgtgg agggtgctga tctatacaga
1621 attagacaca actatgtcat tattttttgt acctactgct cagaataaaa acacttgaaa
1681 tatgaaaaaa aaaaaaaaaa aaaaaaaaaa
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