LOCUS BC033337 2205 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens spermatogenesis associated 12, mRNA (cDNA clone
MGC:43027 IMAGE:4838903), complete cds.
ACCESSION BC033337
VERSION BC033337.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32171193.
FEATURES Location/Qualifiers
source 1..2205
/db_xref="H-InvDB:HIT000093049"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43027 IMAGE:4838903"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2205
/gene="SPATA12"
/gene_synonym="SRG5"
/db_xref="GeneID:353324"
/db_xref="HGNC:HGNC:23221"
/db_xref="MIM:609869"
CDS 451..1023
/gene="SPATA12"
/gene_synonym="SRG5"
/codon_start=1
/product="spermatogenesis associated 12"
/protein_id="AAH33337.1"
/db_xref="GeneID:353324"
/db_xref="HGNC:HGNC:23221"
/db_xref="MIM:609869"
/translation="MSSSALTCGSTLEKSGDTWEMKALDSSRLVPWPPRGLGSSTQHP
NKPHCALASCQGPGVLPGAASAIPELTFQGDVYQSETCQRYLQAAISLDIAVSQINLL
GRPSSPPALLIQQGSCEQVIHNSTPQFLGMEDGDNERTTGWLWRLCEDIDAEPSSTGC
SRSNQLTFTEGCFVRSLSTVYSNTHIHTHL"
BASE COUNT 567 a 586 c 500 g 552 t
ORIGIN
1 agtcactgag aaaattcttt gtgcaggctc accttcccct catctccccc actcttcctg
61 atcctgcagc gtcagatccc agcctgcagt atcagacctc aaaaggagcc tctggtgtct
121 tccaaaaggg aaggaaagag agagaaagcc actggagttg ggcagcgtgg gaagctgtga
181 aagtggacaa gcgtgaaaga gcttccaagt agtgggaaca gcagaagcaa agatgtgaac
241 atgggaaaac ctctgcagta tctgggtgac tgtggggttt ggctctgttt gagcaccccg
301 ggatgattgg tggtggggtg tggctgaagg tgaattggaa cagtgcactc agagccaggt
361 tgcaagagtg ctgcatgctc ctcagggatt ggctccggcc aagtgcccca gcctcctttt
421 ctggagaatt ctgtttttga cttgggcccc atgtccagtt ctgctctgac ttgtgggtcc
481 accttagaaa agtcaggaga cacctgggaa atgaaggcac tagactcttc cagactcgtt
541 ccatggccac ccagaggcct tgggtcatcc acccaacatc ccaacaaacc ccactgtgca
601 ctggcatcat gccagggtcc aggtgtcctg ccaggagcag cctctgccat cccagagctg
661 acatttcagg gggatgtgta ccaaagtgag acctgtcaga gatatttaca agcagccatc
721 tctcttgaca tcgctgtatc ccaaataaat cttctgggaa gaccctcttc acctccagct
781 ctcctgatac agcaaggcag ttgtgagcaa gttattcata actctacacc tcaatttctt
841 ggtatggaag atggggataa tgagaggacc acaggatggt tgtggagact gtgtgaggat
901 atagatgccg agcccagtag cacagggtgc agccgttcaa accaactgac atttactgag
961 ggctgctttg tcaggtccct ctctacagta tactccaaca cacacataca cacacatctg
1021 taatcaatag taatcctgca acatctgaga gtctggcagc tgtttgtctg ggcctttgca
1081 catgctatgc cctcccttcc atcccccacc cccaccaggg gtgactcgta gccatccctt
1141 tctgcatctt cttagatatc actttttcca agaagcctcc ctgtcacact tccccaatat
1201 cacagatgaa gaaatcaaga ttcagaaagg ttaagttact ggcacaaggt cacacaatcc
1261 agatatcata ctcttagccc ccggggaacc ttcactgtat taaatgacat caattgatca
1321 atcaatcgat caatcaatga aagagtggga ggcatgcatc tcctgatccc cgatcctata
1381 cattttcatc tctttattgt ttctatcaaa gcctgctaag taattacttt ccctctgggt
1441 aagtgccact aggtgatgag gtgaggtaat caaatgacat agaagaggaa ggagtccact
1501 gccagggtag gtgcagtgga gcaagtctta caatgtgcag gattataact ccagcaatga
1561 cccctaggct catgctcatt ccccaggtgg cagtttcaga acacattgct caggtctcac
1621 cctgtaaatg taggtaccag ccttctagtt gaccatcaga acacacaacg ccaagatctt
1681 actccagcca cctgccagga cctggagggc aggaggagag ttctgcctac attgtctcat
1741 tttccctccc cttctgcagt gagatagacc atgtccagtg ctcaggagtt gactggccac
1801 actggggagt ttgaccacaa cattgggctc catatgcatg gaatgaggtt gcatgcaatt
1861 gtccatgagg ctgctccctc atttgtctgg gtttctgctc caatgctatc tcctcagaaa
1921 gaccttctct gactgaagcc agctctgcct ccatcccatc actctggatc tccttcccca
1981 gcttcatctc cattacactg gccactctcc ctcacatctt attactgatc tagttgtcta
2041 ctgtccatct ccaccactgg gatgtaaact ccacaaggga ggaatgctgt cagtttcttt
2101 gactgctgtg tggtcagtac cagggcaatg cctcgcacag agtagccctc tctccctaaa
2161 tgtttttgaa taaatgaaat aaatgagcaa aaaaaaaaaa aaaaa
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