LOCUS BC033292 1904 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens interleukin 20 receptor beta, mRNA (cDNA clone
IMAGE:4749974), complete cds.
ACCESSION BC033292
VERSION BC033292.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1904)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255072
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1904
/db_xref="H-InvDB:HIT000051104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4749974"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1904
/gene="IL20RB"
/gene_synonym="DIRS1"
/gene_synonym="FNDC6"
/gene_synonym="IL-20R2"
/gene_synonym="MGC34923"
/db_xref="GeneID:53833"
/db_xref="HGNC:HGNC:6004"
/db_xref="MIM:605621"
CDS 382..825
/gene="IL20RB"
/gene_synonym="DIRS1"
/gene_synonym="FNDC6"
/gene_synonym="IL-20R2"
/gene_synonym="MGC34923"
/codon_start=1
/product="IL20RB protein"
/protein_id="AAH33292.1"
/db_xref="GeneID:53833"
/db_xref="HGNC:HGNC:6004"
/db_xref="MIM:605621"
/translation="MKHLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSL
TEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTILTRPGMEITKDG
FHLVIELEDLGPQFEFLVAYWRREPGAEERPFPWYWPCLPLLASC"
BASE COUNT 502 a 456 c 490 g 456 t
ORIGIN
1 cagacctcag ctccaacata tgcattctga agaaagatgg ctgagatgga cagaatgctt
61 tattttggaa agaaacaatg ttctaggtca aactgagtct accaaatgca gactttcaca
121 atggttctag aagaaatctg gacaagtctt ttcatgtggt ttttctacgc attgattcca
181 tgtttgctca caggctggag tgcagtggtg caatctcagc ttactgcaac ctccgccagt
241 gaggcccttc attagacact aatttgaagc tatggcattc ccccactatg agcccacctg
301 tcagccaggc tatctgcctt gatcctagat gaagtggcca ttctgcctgc ccctcagaac
361 ctctctgtac tctcaaccaa catgaagcat ctcttgatgt ggagcccagt gatcgcgcct
421 ggagaaacag tgtactattc tgtcgaatac cagggggagt acgagagcct gtacacgagc
481 cacatctgga tccccagcag ctggtgctca ctcactgaag gtcctgagtg tgatgtcact
541 gatgacatca cggccactgt gccatacaac cttcgtgtca gggccacatt gggctcacag
601 acctcagcct ggagcatcct gaagcatccc tttaatagaa actcaaccat ccttacccga
661 cctgggatgg agatcaccaa agatggcttc cacctggtta ttgagctgga ggacctgggg
721 ccccagtttg agttccttgt ggcctactgg aggagggagc ctggtgccga ggagaggcca
781 ttcccctggt actggccctg tttgcctttg ttggcttcat gctgatcctt gtggtcgtgc
841 cactgttcgt ctggaaaatg ggccggctgc tccagtactc ctgttgcccc gtggtggtcc
901 tcccagacac cttgaaaata accaattcac cccagaagtt aatcagctgc agaagggagg
961 aggtggatgc ctgtgccacg gctgtgatgt ctcctgagga actcctcagg gcctggatct
1021 cataggtttg cggaagggcc caggtgaagc cgagaacctg gtctgcatga catggaaacc
1081 atgaggggac aagttgtgtt tctgttttcc gccacggaca agggatgaga gaagtaggaa
1141 gagcctgttg tctacaagtc tagaagcaac catcagaggc agggtggttt gtctaacaga
1201 acactgactg aggcttaggg gatgtgacct ctagactggg ggctgccact tgctggctga
1261 gcaaccctgg gaaaagtgac ttcatccctt cggtcctaag ttttctcatc tgtaatgggg
1321 gaattaccta cacacctgct aaacacacac acacagagtc tctctctata tatacacacg
1381 tacacataaa tacacccagc acttgcaagg ctagagggaa actggtgaca ctctacagtc
1441 tgactgattc agtgtttctg gagagcagga cataaatgta tgatgagaat gatcaaggac
1501 tctacacact gggtggcttg gagagcccac tttcccagaa taatccttga gagaaaagga
1561 atcatgggag caatggtgtt gagttcactt caagcccaat gccggtgcag aggggaatgg
1621 cttagcgagc tctacagtag gtgacctgga ggaaggtcac agccacactg aaaatgggat
1681 gtgcatgaac acggaggatc catgaactac tgtaaagtgt tgacagtgtg tgcacactgc
1741 agacagcagg tgaaatgtat gtgtgcaatg cgacgagaat gcagaagtca gtaacatgtg
1801 catgtttgtt gtgctccttt tttctgttgg taaagtacag aattcagcaa ataaaaaggg
1861 ccaccctggc caaaagcggt ctttaaaaaa aaaaaaaaaa aaaa
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