LOCUS BC033290 2298 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens oligodendrocyte transcription factor 1, mRNA (cDNA
clone MGC:24984 IMAGE:4940343), complete cds.
ACCESSION BC033290
VERSION BC033290.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2298)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2298)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 23.
FEATURES Location/Qualifiers
source 1..2298
/db_xref="H-InvDB:HIT000051103"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24984 IMAGE:4940343"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2298
/gene="OLIG1"
/gene_synonym="BHLHB6"
/db_xref="GeneID:116448"
/db_xref="MIM:606385"
CDS 111..926
/gene="OLIG1"
/gene_synonym="BHLHB6"
/codon_start=1
/product="OLIG1 protein"
/protein_id="AAH33290.1"
/db_xref="GeneID:116448"
/db_xref="MIM:606385"
/translation="MYYAVSQARVNAVPGTMLRPQRPGDLQLGASLYELVGYRQPPSS
SSSSTSSTSSTSSSSTTAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQ
QQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNY
ILLLGSSLQELRRALGEGAGPAAPRLLLAGLPLLAAAPGSVLLAPGAVGPPDALRPAK
YLSLALDEPPCGQFALPGGGAGGPGLCTCAVCKFPHLVPASLGLAAVQAQFSK"
misc_feature 429..602
/gene="OLIG1"
/gene_synonym="BHLHB6"
/note="HLH; Region: Helix-loop-helix DNA-binding domain"
/db_xref="CDD:pfam00010"
BASE COUNT 385 a 770 c 702 g 441 t
ORIGIN
1 gttctagatc gtttccccgc gcgcaggtcc gcggggaggg gcggcctgcc gaccggccca
61 ccccagggcg ttcctgaagg gcgtcctcgg ccgcccccac cgcctcccag atgtactatg
121 cggtttccca ggcgcgcgtg aacgcggtcc ccgggaccat gctgcggcca cagcggcccg
181 gagacttgca gctcggggcc tccctctacg agctggtggg ctacaggcag ccgccctcct
241 cctcctcctc ctccacctcc tccacctcct ccacttcctc ctcctccacg acggcccccc
301 tcctccccaa ggctgcgcgc gagaagccgg aggcgccggc cgagcctcca ggccccgggc
361 ccgggtcagg cgcgcacccg ggcggcagcg cccggccgga cgccaaggag gagcagcagc
421 agcagctgcg gcgcaagatc aacagccgcg agcggaagcg catgcaggac ctgaacctgg
481 ccatggacgc cctgcgcgag gtcatcctgc cctactcagc ggcgcactgc cagggcgcgc
541 ccggccgcaa gctctccaag atagccacgc tgctgctcgc ccgcaactac atcctactgc
601 tgggcagctc gctgcaggag ctgcgccgcg cgctgggcga gggcgccggg cccgccgcgc
661 cgcgcctgct gctggccggg ctgcccctgc tcgccgccgc gcccggctcc gtgctgctgg
721 cgcccggcgc cgtaggaccc cccgacgcgc tgcgccccgc caagtacctg tcgctggcgc
781 tggacgagcc gccgtgcggc cagttcgctc tccccggcgg cggcgcaggc ggccccggcc
841 tctgcacctg cgccgtgtgc aagttcccgc acctggtccc ggccagcctg ggcctggccg
901 ccgtgcaggc gcaattctcc aagtgagggc gggtctgggc ctggggcgcg acctcggccc
961 ggcctccctt cgctcagctt ctccgcgccc ctgctccctg cgtctgggag agcgaggccg
1021 agcaaggaaa gcatttcgaa ccttccagtc cagaggaagg gactgtcggg cacccccttc
1081 cccgccccca cccctgggac gttaaagtga ccagagcgga tgttcgatgg cgcctcgggg
1141 cagtttgggg ttctgggtcg gttccagcgg ctttaggcag aaagtgctcg ctctcaccca
1201 gcacatctct ctccttgtcc ctggagttgc gcgcttcgcg gggccgatgt agaacttagg
1261 gcgccttgcc gtggttggcg cgccccgggt gcagcgagag gccatccccg agcgctacct
1321 ccccggagcg gagcacgcgg gctcccagta ctaggggctg cgctcgagca gtggcggggg
1381 cggaggggtg gttcttttcc ttctcctccg ccagaggcca cgggcgccct tgttcccgcc
1441 ggccaggtcc tatcaaagga ggctgccgga actcaagagg cagaaaaaga ccagttaggc
1501 ggtgcagacg gtctgggacg tggcagacgg acggaccctc ggcggacagg tggtcggcgt
1561 cggggtgcgg tgggtagggg cgaggacaac gcagggtgcg ctgggttggg acgtgggtcc
1621 acttttgtag accagctgtt tggagagctg tatttaagac tcgcgtatcc agtgttttgt
1681 cgcagagagt tttcactctt aaatcctggg ggtttcttag aaagcaactt agaactcgag
1741 attcaccttt cgtttccctt tccccaaaag tagcgtaacc aacatttaag cttgcttaaa
1801 aacgaaaacc aaccgccttg catccagtgt tcccgattta ctaaaatagg taaccaggcg
1861 tctcacagtc gccgtcctgt caagagcgct aatgaacgtt ctcattaaca cgcaggagta
1921 ccgggagccc tgaaccgccc gctgctcggc ggatcccagc tgcggtggcg acggcgggaa
1981 ggcgctttcc gctgttcctc agcgggccgg gcccttgacc agcgcggccc gcaggtcttc
2041 cttctcgccg tcttgcagtt gaagagctac atacgtagtc agtttcgatt tgttacagac
2101 gttaacaaat tcctttaccc aaggttatgc tatgaccttt ccgcagttta ctttgatttt
2161 ctatgtttaa ggttttggtt gttggtagta gccgaattta actggcactt tattttactt
2221 ctaaccttgt ttcctgacgg tgtacagaat caacaaaata aaacatttaa agtctgattt
2281 tttaaaaaaa aaaaaaaa
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