LOCUS BC033233 1332 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens SNAP25-interacting protein, mRNA (cDNA clone
IMAGE:5423326), complete cds.
ACCESSION BC033233
VERSION BC033233.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1332)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1332)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: l Column: 24
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1332
/db_xref="H-InvDB:HIT000041848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5423326"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1332
/gene="SNIP"
/gene_synonym="KIAA1684"
/db_xref="GeneID:80725"
CDS 465..1238
/gene="SNIP"
/gene_synonym="KIAA1684"
/codon_start=1
/product="SNIP protein"
/protein_id="AAH33233.1"
/db_xref="GeneID:80725"
/translation="MRVSEAARRQEDPLQRQRTLVEEERLRYLNDEELITQQLNDLEK
SVEKIQRDVSHNHRLVPGPELEEKALVLKQLGETLTELKAHFPGLQSKMRVVLRVEVE
AVKFLKEEPQRLDGLLKRCRGVTDTLAQIRRQVDEGVWPPPNNLLSQSPKKVTAETDF
NKSVDFEMPPPSPPLNLHELSGPAEGASLTPKGGNPTKGLDTPGKRSVDKAVSVEVLG
PGIVGGAMSQVHTFLRPSFLEWGVPILWVFFLGGGGPVP"
BASE COUNT 276 a 434 c 383 g 239 t
ORIGIN
1 cgcccgagtc cttcgccgct cactggcctc tctccgaacc ctttctcccc ttcccctttc
61 ttgagcttcc gctccctcgc tgaacctcca cttcctcacc aaggccttat ccctcgcccg
121 tgaccccctc attgagccct ccttctcctt ccctgagtcc ccatcgccct cctggagccc
181 cagtcaccca ctgagcccct ccgtcgtcag tatccctcgg ggcagttcca gttccttcct
241 gccctgcatc cctttccctg agtcagcgag agcccttccc ccaagtcctc tcagctcctc
301 cctcctgagc cccaacagtc tccccggccc tgcttggcag atggtcccac ctgtcaggag
361 cttggcatcg ccgagtccgc tcctcaagca ggcccagggg ccgtcagcta cagaaccagg
421 agtcggtgcg cgcgctgctg aagcgcacgg aggcagagct gagcatgcgc gtgtcggagg
481 cggcgcggcg gcaggaggac ccgctgcagc ggcagcgcac cctggtggaa gaggaacggc
541 tgcgctatct caacgacgag gagcttatta cccagcagct caatgacctg gagaaatcgg
601 tggagaagat ccagagagac gtgtcccaca accaccggct ggtgcccggc cctgagctgg
661 aggagaaggc actggtgctg aagcagctcg gggagacgct gacagagctc aaggctcact
721 tcccgggcct gcagagcaag atgcgggtgg tgctgcgcgt ggaggtggag gcggtgaagt
781 tcctgaagga ggagccccag cgcctggatg ggctcctcaa gcgctgccgc ggggtcacgg
841 acacgctggc ccagatccga aggcaagtgg atgagggtgt gtggccaccc cccaacaatc
901 tcctgagtca gtcccccaag aaggtgacgg cagagactga cttcaacaag agcgtggact
961 tcgaaatgcc accccccagc cccccgctga acctgcatga gctgagcggg ccagctgaag
1021 gagcctctct tacccccaag gggggcaacc ccaccaaagg cctggacact cctggcaaga
1081 gaagcgtgga caaagctgtg tctgttgagg tgctggggcc agggattgtg ggtggggcca
1141 tgagccaggt tcacacattc ttacgaccat ccttcctaga gtggggagtg ccaatcctgt
1201 gggtcttttt ccttggggga ggagggccag tgccctaatg gaagcctaag aagcataatg
1261 agggtgacat tagccctcct agacagaaag cgtattataa agctacaata atcaaaaaaa
1321 aaaaaaaaaa aa
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