LOCUS BC033229 2551 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens KRAB-A domain containing 1, mRNA (cDNA clone
IMAGE:5091450), partial cds.
ACCESSION BC033229
VERSION BC033229.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2551)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2551)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: j Column: 6.
FEATURES Location/Qualifiers
source 1..2551
/db_xref="H-InvDB:HIT000092995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5091450"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2551
/gene="KRBA1"
/gene_synonym="KIAA1862"
/db_xref="GeneID:84626"
/db_xref="HGNC:HGNC:22228"
CDS <1..2010
/gene="KRBA1"
/gene_synonym="KIAA1862"
/codon_start=1
/product="KRBA1 protein"
/protein_id="AAH33229.1"
/db_xref="GeneID:84626"
/db_xref="HGNC:HGNC:22228"
/translation="PGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPPGP
ASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLKGIPPNGSSPS
QLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVRDGPSRPLAPR
GTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLKEIPVPVLRPA
WPCSSAADRGPRRAEPRNWTADKEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPS
PSPSPGSSSSFSGSEGEDPRPEPELWKPLPQERDRLPSCKPPVPLSPCPGGTPAGSSG
GSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKT
HERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALA
EKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWTLPRGPRWAHGPGH
RHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPLPPDAPPAEPPGLH
CSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQGASPPAASADADV
PTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGGEHRDPRWGAH"
BASE COUNT 490 a 865 c 753 g 443 t
ORIGIN
1 ccaggagcct ggaaaagggg ttctggaggg cctggatacc tcctgacccc tcctccccat
61 cctgatcttg gagctggcgg tctgctctct gtgaagatgg agaacagctg ggtccagagc
121 cccccaggac ctgcatcctg tcagcctggc aggcagcccc tcagtccctc agccactgga
181 gacaccagag gggtccccca acccagctgg ggccctgagg ctcaagctgc cagtgcctca
241 agctcaccgc tggaagccct ggaagcctgt ctgaagggca ttcccccaaa tgggtcgtca
301 ccttcccagc tgccacccac ttcttgttcc cagaaccccc agccaggaga ctctaggtct
361 cagaagcctg aactgcaacc ccacagatca cacagtgaag aagcgaccag agagcctgtt
421 ctgcctctgg gtctgcagag ctgtgtgaga gatggcccca gcaggcccct ggccccccga
481 ggaaccccca ccagcttctc ctcatccagc agcaccgact gggacctgga ttttgggagt
541 cctgtgggga accaggggca gcatcctgga aaaggaagcc caccaggaag ctccccactg
601 cagggtctgg agaattgtct caaggagata cctgtgcctg tgctgcggcc tgcctggccc
661 tgctcctcag cagcagacag gggaccgagg agagcagagc ccaggaactg gacagcagac
721 aaggaagggt ctgcccccaa gccctccccg ctgcactgcc tggagagcgc cctgaggggg
781 atcttgcctg taaggccctt gcgcttcgcc tgcgtgggag gccccagccc cagccccagc
841 cccggctcca gctcgagctt cagcggctct gaaggagaag acccgaggcc agagcctgag
901 ctctggaagc cgctccccca ggagagggac cgccttccca gctgtaagcc tcctgtccct
961 ctgtccccat gtcctggtgg gacccctgct ggcagcagtg gcggcagccc tggtgaagac
1021 cccaggagaa cagagcccag gtactgcagc ggcctcggtg caggtacagc tcaggatccc
1081 tgcccggttt ctcagctgga gaaaaggccc agggttagtg aagcatccag aggcctggag
1141 cttggacatg gaagacccag agttgcagcc aagacccatg agaggctgct cccccagggc
1201 ccgcctgagc tgcccagtga gtctccccct ccggagctgc cccctccgga agctgcgcct
1261 cctgtgttgc cagcctcctc cctgcagccg ccatgccact gtgggaagcc cctgcagcag
1321 gagctgcaca gcctcggtgc tgcccttgcg gagaagctgg atcggctcgc cacagcgctg
1381 gcaggcctgg ctcaggaagt ggccaccatg aggacccagg tgaatcggct ggggaggcgc
1441 ccccaaggcc ctgggccaat gggccaagct tcctggatgt ggaccctccc acggggacct
1501 cgctgggctc atggccctgg tcacagacat ctgccctact ggaggcagaa gggacccacg
1561 aggcctaaac caaagatcct gcgtggccag ggagagagct gcagggctgg tgacctgcaa
1621 ggactctcca gagggaccgc tcgccgggca cgtccgctgc ctccagacgc tcccccggca
1681 gaacctcctg ggctccactg cagctcttcc cagcagctgc tgtcctctac acccagctgc
1741 catgctgcgc cgcctgcaca ccccctcctc gcacataccg ggggccacca gagccccctt
1801 ccccctttag tgcctgctgc cttacccctg cagggagcct ctcctcctgc agccagtgca
1861 gatgcagacg tgccgacctc aggagtggca ccagacggga tcccagagcg gcccaaggag
1921 ccgagcagcc tgctgggagg agtgcagagg gccctccagg aagaactgtg gggtggggag
1981 cacagggacc cgagatgggg ggcgcattga tggcattcct cttctccaca tctgctcgtt
2041 cttgccgagg gtgcagtggt ggcgtggaag ccctgtcacc ccaccccagg ccaccctctc
2101 ccagaggacg ccatctccct tactgttgct gggagcctcg ccctttgtcc caactgggta
2161 gagcccccag gtgctgtttg ctcaggaggc tgctgtgggg gtgccttcct cagcctctgg
2221 ccctcttggc tcagattcaa tcaaatgttg cttccctctc ctgtctttcc cactggagcc
2281 gcccaagctt gtaggtgggt ggtgtgcata ggccacgtgt gccccacata tgcagggggt
2341 gccccacaca gctagagcgg ccaggagagc gcctcctaac caccagccgt tcctgatctc
2401 aggagccttg aagggctggg ctcttgcctt cctggagtaa atattggcac agatttcatt
2461 tgagagaact cagccccctg gtctaagctg gacttacctc tgtggattct gaaattaaag
2521 aagtgagttg ctaaaaaaaa aaaaaaaaaa a
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