LOCUS BC033169 2958 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens alanyl-tRNA synthetase 2, mitochondrial (putative),
mRNA (cDNA clone IMAGE:4550771), partial cds.
ACCESSION BC033169
VERSION BC033169.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: e Column: 8.
FEATURES Location/Qualifiers
source 1..2958
/db_xref="H-InvDB:HIT000092963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4550771"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2958
/gene="AARS2"
/gene_synonym="bA444E17.1"
/db_xref="GeneID:57505"
/db_xref="HGNC:HGNC:21022"
CDS <1..2358
/gene="AARS2"
/gene_synonym="bA444E17.1"
/codon_start=1
/product="AARS2 protein"
/protein_id="AAH33169.1"
/db_xref="GeneID:57505"
/db_xref="HGNC:HGNC:21022"
/translation="LSFGPQENFWEMGDTGPCGPCTEIHYDLAGGVGAPQLVELWNLV
FMQHNREADGSLQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGCRA
PPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRILRRAVRF
SMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAFLASLERGRRI
IDRTLRTLGPSDMFPAEVAWSLSLCGDLGLPLDMVELMLEEKGVQLDSAGLERLAQEE
AQHRARQAEPVQKQGLWLDVHALGELQRQGVPPTDDSPKYNYSLRPSGSYEFGTCEAQ
VLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVLFPVAR
AQVCGGFILHEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGT
EQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPLALTAQVP
GLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII
GDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDI
GRLIEAVETAVMPQWQRRELLATVKMLQRRANTAIRKLQMGQAAKKTQELLERHSKGP
LIVDTVSAESLSVLVKVVRQLCEQAPSTSVLLLSPQPMGKVLCACQVAQGAMPTFTAE
AWALAVCSHMGGKAWGSRVVAQGTGSTTDLEAALSIAQTYALSQL"
BASE COUNT 659 a 822 c 945 g 532 t
ORIGIN
1 ctttcctttg gaccacaaga gaacttctgg gagatggggg atactggccc ttgtgggccc
61 tgtactgaga tccactacga ccttgctggt ggggtgggag ccccccagct ggtagagctt
121 tggaacctgg tcttcatgca acacaacaga gaggcagatg gaagcctgca gcccctgccc
181 cagcggcatg tggacacagg aatgggcctg gaaaggctgg tggctgtgct gcaaggcaaa
241 cactccacct atgacactga cctcttttcc ccgctgctca acgccataca gcagggctgc
301 agggcacccc cttacttggg ccgagtaggg gtggcagacg aggggcgcac agacacagcg
361 taccgcgtgg tggctgacca catccgcaca ctcagtgtct gcatctctga tggcgtcttc
421 cctgggatgt caggtccccc gctggttctt cgtcggatcc tgcgtcgagc tgtgcgtttc
481 tccatggaga tcttaaaggc accacctggc ttcctaggca gcctggtacc tgtagtggtg
541 gagacactgg gagatgctta tccagaactg caaaggaact cagcccagat cgccaacctg
601 gtgtcagagg acgaggcagc cttcctggcc tccctggagc ggggtaggcg gatcattgat
661 cggactctga ggaccctggg gccttcagat atgttccctg ctgaagtggc ctggtccttg
721 tcactgtgtg gagacctggg actccccttg gacatggtag agctgatgct ggaggagaaa
781 ggggtccagc tagactccgc tggactggag cggttggccc aagaggaggc ccagcaccgg
841 gcacggcagg ctgagccagt tcagaagcag ggattgtggc ttgatgtcca tgcgcttggg
901 gagctgcagc gccaaggagt gcccccaact gacgacagcc ccaagtacaa ctactccctg
961 cgacccagcg gaagttatga gttcggcacc tgtgaggccc aggtgttgca actgtataca
1021 gaggacggga cagcagtggc ctccgtgggg aaaggccagc gctgtggcct cctcttggac
1081 aggaccaact tctacgcaga acaggggggc caggcttcag accgtggcta cctggtgcgg
1141 gcagggcaag aggacgtgct gttcccagta gcccgggccc aggtctgtgg aggtttcatc
1201 ctgcatgagg cagtagcccc tgagtgcctg cggttagggg accaggtgca gctgcatgtg
1261 gatgaggcct ggcgtctagg ctgcatggcg aagcatacgg ccacccacct gctgaactgg
1321 gcactgaggc agaccctggg ccctggcaca gagcagcagg gctcccatct caatcctgag
1381 cagctgcgct tggatgtgac cacccagacc ccattgaccc cagagcagct ccgggcagtg
1441 gagaacactg tgcaggaggc cgtggggcag gatgaggctg tgtacatgga ggaggtgccc
1501 ctggcgctca ctgcccaggt ccctggcctg cgctctctgg atgaggttta cccagaccct
1561 gtgcgggtgg tatcagtggg ggtgcccgtg gcccatgcat tggacccagc ctcccaagcc
1621 gcactgcaga cctctgtgga gctatgctgt gggacgcacc tgttacgtac tggggctgta
1681 ggggacctgg ttatcatcgg ggaccgccag ctttccaagg gcactacccg cctgctggcc
1741 gtcactgggg agcaggccca gcaggcccga gagctaggcc agagcctggc ccaggaagtg
1801 aaagcggcca ctgagcggct gagtctgggg agccgggatg tggcggaggc actgaggctg
1861 tccaaggaca taggacgact cattgaagct gtggaaactg ctgtgatgcc ccagtggcag
1921 cggcgggagc tgctggccac agtgaagatg ctgcagcggc gtgccaacac tgccatccgt
1981 aagctgcaaa tgggacaggc tgcaaaaaaa actcaggagc tgctggagcg gcactcgaag
2041 gggcctctga ttgtggacac agtctctgct gagtctctct cagtgctggt gaaggtggta
2101 cggcagctgt gtgagcaggc ccccagcacg tctgtgctcc tactcagccc ccagcccatg
2161 gggaaggtgc tgtgtgcctg tcaggtggcc cagggtgcca tgcccacctt cacagcagag
2221 gcctgggcac tggcagtgtg cagccacatg gggggcaagg cgtggggctc gcgagtggtg
2281 gcccaaggca ccggaagcac tactgacctg gaagctgccc tcagtatagc ccaaacctat
2341 gccctcagcc agctctgacc caggtccgcc cagggaccca catggactaa aggcaatgcc
2401 aggagccctg aaggagccag cagaaccttc ccacatgctg aagcgaggac tagaggctgg
2461 aggccaagca gctgagccaa agaagatcac ctgggccagg gcctacatga cacaaggaga
2521 catgggctag ggaaggcaga actgggccca aagacacaca cccccttggt gaaagagaag
2581 acatggacaa ttatggctgt gactgcacat tagaaattat ttcactggcc gggtgtggtg
2641 gttcacacct gtaatccaag cactttggga ggccgaggca ggtagatcat gaggtcagaa
2701 gatcaaaacc atcctggcta acacggtgaa accccatctc tactaaaaat acaaaaaatt
2761 agccgggtgt ggtggcacac acctgtagtc ccagctactc gggaggctga ggcagaagaa
2821 tcgcttgaac ctgggaggtg gaggttgcag tgggccaaga tcgcaccact gcactccagc
2881 ctgggtgaca gagcgagact ctgtctcaaa taaataaatt atttcacaga aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaa
//