LOCUS BC033131 1856 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens protein tyrosine phosphatase, receptor type, U, mRNA
(cDNA clone IMAGE:3611600), with apparent retained intron.
ACCESSION BC033131
VERSION BC033131.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1856)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1856)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: b Column: 17
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1856
/db_xref="H-InvDB:HIT000092939"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3611600"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 432 a 525 c 511 g 388 t
ORIGIN
1 ggccttcatc gtgaccctgc acccgctgca gagcaccacg cccgacttct ggcggctggt
61 ctacgattac gggtgcacct ccatcgtcat gctcaaccag ctgaaccagt ccaactccgc
121 ctggccctgc ctgcagtact ggccagagcc aggccggcag caatatggcc tcatggaggt
181 ggagtttatg tcgggcacag ctgatgaaga cttagtggct cgagtcttcc gggtgcagaa
241 catctctcgg ttgcaggagg ggcacctgct ggtgcggcac ttccagttcc tgcgctggtc
301 tgcataccgg gacacacctg actccaagaa ggccttcttg cacctgctgg ctgaggtgga
361 caagtggcag gccgagagtg gggatgggcg caccatcgtg cactgcctaa acgggggagg
421 acgcagcggc accttctgcg cctgcgccac ggtcctggag atgatccgct gccacaactt
481 ggtggacgtt ttctttgctg ccaaaaccct ccggaactac aaacccaaca tggtggagac
541 catggatcag taccactttt gctacgatgt ggccctggag tacttggagg ggctggagtc
601 aagatagcgg ggccctggcc tggggcaccc actgcacact cagggccaga cccaccatcc
661 tggactggcg aggaagatca gtgcctcctg ctctgcccaa acacactccc atggggcaag
721 cactggagtg gatgctgggc tatcttgctc ccccttccac tgtgggcagg gcctttcgct
781 tgtcccatgg gcgggtggtg ggccaaggag gagcttagca agtctgcagc ccagccccac
841 ctccataggg tcctgcaggc ctgtgctgag aggcctggtg ctgcctggca gagtgacaaa
901 ggctcaggac ggctggctct gggggactca ggccaagccc cttggcacca tcctggcttt
961 tggcagggat gagtgaggcc ctgcagagag catcccaggc caaggttccc actcagcctg
1021 ccccctctgc atgtgggtag aggatgtact gggacttggc atttaggatt ccatctggcc
1081 cagcccctga aggtcctggg gaagcaggtc tcaattctga atagccagtg gggcacactg
1141 actgtcctcc ccaggggaac tgcagcgccc tcctccccac tgccccctgc agcccctgag
1201 atattttgct cactatccct ccccacttgc ttccctgata tgtgctctga gcttccctga
1261 accaggatct gcctattact gctgtgcccc atggggggct ccttccctgc ctgacccact
1321 gttgcagaat gaagtcacct cgcccccctc ttcctttaat cttcaggcct cactggcctg
1381 tcctgctcag cttgggccag tgacaatctg caaggctgaa caacagcccc tggggttgag
1441 gcccctgtgg ctcctggtca ggctgcccgt tgtggggagg ggcagtgtta gagcagggct
1501 ggtcataccc tctggagttc agaggaagag gtaggaccag tgcttttttg tttcttttgt
1561 tatttttggt tgggtgggtg ggaaggtctc tttaaaatgg ggcaggccac acccccattc
1621 cgtgcctcaa tttccccatc tgtaaactgt agatatgact actgacctac ctcgcagggg
1681 gctgtgggga ggcataagct gatgtttgta aagcgctttg taaataaacg tgctctctga
1741 atgccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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