LOCUS BC033122 1719 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens pecanex homolog (Drosophila), mRNA (cDNA clone
IMAGE:2822174), complete cds.
ACCESSION BC033122
VERSION BC033122.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: a Column: 1
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1719
/db_xref="H-InvDB:HIT000092932"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2822174"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1719
/gene="PCNX"
/gene_synonym="KIAA0805"
/gene_synonym="KIAA0995"
/db_xref="GeneID:22990"
/db_xref="HGNC:HGNC:19740"
CDS 206..1483
/gene="PCNX"
/gene_synonym="KIAA0805"
/gene_synonym="KIAA0995"
/codon_start=1
/product="PCNX protein"
/protein_id="AAH33122.1"
/db_xref="GeneID:22990"
/db_xref="HGNC:HGNC:19740"
/translation="MDDGTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQQQELVFL
RNRNPERGSIQNAKQALRNMINSSCDQPIGYPIFVSPLTTSYSDSHEQLKDILGGPIS
LGNIRNFIVSTWHRLRKGCGAGCNSGGNIEDSDTGGGTSCTGNNATTANNPHSNVTQG
SIGNPGQGSGTGLHPPVTSYPPTLGTSHSSHSVQSGLVRQSPARASVASQSSYCYSSR
HSSLRMSTTGFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPS
SSSSSQSIPACKHHTLVGFLATEGGQSSATDAQPGNTLSPANNSHSRKAEVIYRVQIV
DPSQILEGINLSKRKELQWPDEGIRLKAGRNSWKDWSPQEGMEGHVIHRWVPCSRDPG
TRSHIDKAVLLVQIDDKYVTVIETGVLELGAEV"
BASE COUNT 476 a 436 c 401 g 406 t
ORIGIN
1 cctcgtgccg ggatccgtat gtccattaaa cttcatcagt atttaggatc attttacttc
61 tccagatgaa tatgatgacc ctactgtgct ctatgaagcc atagtatctc atgagaagaa
121 cctcgtaata gcccatgaag gggaccctgc atggcggagt gcagtacttg ccaactctcc
181 ctccttgctt gctctgcggc atgtcatgga tgatggcacc aatgaatata aaatcatcat
241 gctcaacaga cgctacctga gcttcagggt cattaaagtg aataaggaat gtgtccgagg
301 tctttgggca gggcaacagc aggagcttgt ttttctacgt aaccgtaacc cagagagagg
361 tagcatccaa aatgcaaagc aagccctgag aaacatgata aactcatctt gtgatcaacc
421 tattggctac ccaatctttg tctcacccct gacaacttct tactctgaca gccacgaaca
481 gcttaaagac attcttgggg gtcctatcag cttgggaaat atcaggaact tcatagtgtc
541 aacctggcac aggcttagga aaggttgcgg agctggatgt aacagtggtg gcaatattga
601 agattctgat actggaggtg ggacttcctg cactggtaac aatgcaacaa ctgccaacaa
661 tccccacagc aacgtgaccc agggaagcat tggaaatcct gggcagggat caggaactgg
721 actccaccca cctgtcacat cttatcctcc aacactaggc actagccaca gctctcactc
781 tgtgcagtcg ggcctggtca gacagtctcc tgcccgggcc tcagtagcca gccagtcttc
841 ctactgctat agcagccggc attcatccct ccggatgtcc accactgggt ttgtgccttg
901 tcggcgctct tctactagtc agatatcgct tcgaaacttg ccatcatcca tccaatcccg
961 actgtcgatg gtgaaccaaa tggaaccctc aggtcagagc ggcctggcct gtgtgcagca
1021 cggcctgcct tcctccagca gctccagcca aagcatccca gcctgcaaac atcacactct
1081 cgtgggcttt cttgcgacag agggaggtca gagcagtgcc actgatgcac agccaggcaa
1141 caccttaagt cctgccaaca attcacactc cagaaaggca gaagtgattt acagagtcca
1201 aattgtggat cccagtcaaa ttctggaagg gatcaacctg tctaaaagga aagagctaca
1261 gtggcctgat gaaggaatcc ggttaaaagc tgggagaaat agctggaaag actggagtcc
1321 gcaggagggc atggaaggcc atgtgattca ccgatgggtg ccttgcagca gagatccagg
1381 taccagatcc cacatcgaca aggcagtgct tctggtccag attgatgata aatatgtgac
1441 tgtaattgaa actggggtac tagaacttgg ggctgaagtg tgagccagtg tttattataa
1501 agacatttct ttttccctct caattccaag gcattggaaa aagagaggaa caagcagaag
1561 atgcctgcag gtatcacttt gatcctatgt gggagcgact gaaaatagaa tgagcttggt
1621 taagcacctc tcctttgccc ttcaccctga ctcctgtcac tgtctccatc cccaaataaa
1681 gctgaaatat ttttttaagt taaaaaaaaa aaaaaaaaa
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