LOCUS BC033024 1807 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens ATG4 autophagy related 4 homolog C (S. cerevisiae), mRNA (cDNA clone MGC:32915 IMAGE:4838543), complete cds. ACCESSION BC033024 VERSION BC033024.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1807) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1807) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: e Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30410843. FEATURES Location/Qualifiers source 1..1807 /db_xref="H-InvDB:HIT000041764" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32915 IMAGE:4838543" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1807 /gene="ATG4C" /gene_synonym="APG4-C" /gene_synonym="AUTL3" /gene_synonym="FLJ14867" /db_xref="GeneID:84938" /db_xref="HGNC:HGNC:16040" CDS 196..1572 /gene="ATG4C" /gene_synonym="APG4-C" /gene_synonym="AUTL3" /gene_synonym="FLJ14867" /codon_start=1 /product="ATG4 autophagy related 4 homolog C (S. cerevisiae)" /protein_id="AAH33024.1" /db_xref="GeneID:84938" /db_xref="HGNC:HGNC:16040" /translation="MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLL GKCYHFKYEDEDKTLPAESGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSA LTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWPDALNIENSDSESWTSHTVKKFTAS FEASLSGEREFKTPTISLKETIGKYSDDHEMRNEVYHRKIISWFGDSPLALFGLHQLI EYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITIYVAQDCTVYNSDVIDKQS ASMTSDNADDKAVIILVPVRLGGERTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFA GFQDDSLIYMDPHYCQSFVDVSIKDFPLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQ DFKRASEEITKMLKFSSKEKYPLFTFVNGHSRDYDFTSTTTNEEDLFSEDEKKQLKRF STEEFVLL" BASE COUNT 598 a 289 c 370 g 550 t ORIGIN 1 agcgggctga ggtcggaacg tctgcgtgtg tgcgggctgg ttttgtggcg gctgctgcta 61 gagctggagc atttgccggg ttggtggctc ctgcacattt ttacagttct ccagtccttc 121 tctttcgtca gtataaaaga ttaaactcta cagaagaatg caatcaagtg atggcttttc 181 ctttagaatt tgaatatgga ggctacagga acagatgaag ttgacaagct aaaaaccaaa 241 tttatatctg cttggaacaa catgaaatat agttgggtgt tgaaaacaaa gacgtatttt 301 agtagaaatt ctcctgtatt attgcttgga aaatgttacc attttaaata tgaagatgaa 361 gataaaacgt tacctgcaga gtcgggatgt acaatagagg atcacgtaat tgcaggaaat 421 gtagaagaat ttcgtaaaga tttcatttct agaatatggc tgacctacag ggaagaattc 481 cctcaaatag aaggctcagc tttgacaaca gactgtgggt ggggctgcac attgagaact 541 ggccagatgc tcttggctca aggactcata ctacactttc ttggtagagc ttggacctgg 601 cctgatgctt tgaatattga aaattcagac tctgaatcat ggacttccca cactgtcaaa 661 aaatttactg catcatttga agcatcactt tcaggggaaa gagaattcaa aaccccaaca 721 atttctctga aggaaacaat tgggaaatat tctgatgatc atgaaatgcg aaatgaagtt 781 tatcatagga aaatcatctc ttggtttggt gattccccct tggctctttt tggcttacat 841 caactaatag aatatggaaa gaagtctggg aaaaaagcag gagattggta tggaccagct 901 gtggttgctc acattttaag aaaagcagtt gaagaagcaa ggcatcctga tttacaagga 961 ataactattt atgttgcaca agattgtaca gtttacaatt ctgatgtaat tgataaacag 1021 agtgcttcca tgacttctga taatgcagat gacaaagctg ttattattct agttcctgtt 1081 agacttggtg gagaaagaac caacaccgac tacttagaat ttgtgaaggg tattttaagc 1141 ctggaatatt gtgtgggtat tattggtggc aaacctaaac agtcatatta ctttgctgga 1201 tttcaagatg acagtttgat ttacatggat cctcattact gccaatcttt tgtagatgtc 1261 agcataaagg atttccctct tgagacattc cactgccctt ctcccaaaaa gatgtctttt 1321 cgaaaaatgg atcccagctg tacaatagga ttttactgtc gaaatgttca ggacttcaaa 1381 cgagcttctg aagaaatcac caagatgctg aaattttctt ctaaggagaa atatccctta 1441 tttacttttg taaatggtca ttccagagac tatgatttta catctactac aaccaatgaa 1501 gaagaccttt tttcagagga tgaaaagaaa caattaaaaa gatttagcac ggaagagttt 1561 gtcttgcttt aaagattagc acatttgtgc ttgataagaa gaattccatt gaaaggggaa 1621 aaatgaagag aaacaagtat atctgaaatg tttattttca caaatatctt aattttatat 1681 gttctttaaa aaagaacatt tgaaaatata acagttaaag atatttttct aaaagagaaa 1741 tgatttaatg aatcttgctt tctaataaat aaattgagtg attctggttg caaaaaaaaa 1801 aaaaaaa //