LOCUS BC033020 4113 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens heat shock transcription factor family member 5, mRNA
(cDNA clone MGC:27073 IMAGE:4823233), complete cds.
ACCESSION BC033020
VERSION BC033020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4113)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4113)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..4113
/db_xref="H-InvDB:HIT000092895"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27073 IMAGE:4823233"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4113
/gene="HSF5"
/gene_synonym="FLJ40311"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
CDS 115..1905
/gene="HSF5"
/gene_synonym="FLJ40311"
/codon_start=1
/product="heat shock transcription factor family member 5"
/protein_id="AAH33020.1"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
/translation="MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQP
LFEAELLSPPGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKP
AGNGPLHHFHNPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSA
SAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPL
KGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSV
HVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYA
HCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVK
VEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPVGSDIMSFVVGTEQAV
ACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLNHNPSPSSVVFVQEGP
PFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLATPARYREHRSN
SQQGKSPDLHLLVDVACKQERFPKEEELKE"
BASE COUNT 1141 a 938 c 898 g 1136 t
ORIGIN
1 agcgggcgga tgggcgccgg caggagcggg cagggcgagg cgaaggccgg ggagggatcg
61 agaacggtgt gggagagcta ggctcggggg gcgaggcccc ggcccggcgg ggcgatggag
121 gcgctgctct ccacccccat caaccccaac aacttccccg ccaagctgtg gcgcctggtg
181 aacagcccgc gctaccgctc catccgctgg gacggccgcg gcgaggggct gcttatcgat
241 cagccgctct tcgaggccga gctgctcagc ccgcccgggc cggggggcgg tggcgggact
301 gcgggggccg gggccgagcc cgagctcttc aaaaccacca gcttcaccag cttcatccgc
361 cagctcaacc tctacggctt ccgcaaggtg gtgctgggcg ggccgggggg cggcaaaccg
421 gcaggcaatg ggccgctcca tcacttccac aacccgcact tccgccgcga ccagccacag
481 ctgctcgtgc acctcaagcg cctcaccagc gccaacaagg ccaagctggc ggccggcctg
541 gaggtgccct gccgcccgcc caaccgcttc cagcggctgc tcatcacctc ggcctccgcc
601 gccaccgcgc cactgcagca ccagcagccg ccgccgcccg cggggccccg gcccgagccg
661 cacggaccag tggctgtagg acaatttcac cggtcatttc gtcgagatag tttgtctcct
721 tactcctgtg tatcaactcc atcccacgac cacagtactt accctctgaa aggtttagat
781 cggaccccag ttcctcatag aatatggcag aactcccttg gaatgcatcc tggacaagtg
841 gagacatctc ccacattttc agataaaggg gttccgtttc ctgtactcca gaggtttcca
901 actgaggtta cctatacact gcagcccagc accacatctg tacatgttca acaaggtcct
961 caaacaatgg tcagctcctc ccaaaaatac agtaactaca caccctcagc acagtactcg
1021 caagcctact atccaacagc tgtgctacag tgctgttctc ctacccacat ggatgctcta
1081 agtagttgtg tcactcccac tgcctcttcc tatgcacact gcaactactt ccagaatcct
1141 tcaatgcagt cctcctatcc agttgaattt ttgccttcca attggccctg cagtactact
1201 gatgaaaata caaagacaga agtaaaccta gaggctgtct ttcagatagt tgatgagttg
1261 cattcctccc ctaaattgga gatggtaaag gtggagcctg ttgagaatca gtgcccaaca
1321 tctccgtctt acagaggcca acacatttta gctaattcta acaacagcaa tccatgttct
1381 gcaagtcagg ctagccagct ggagccactt actcctgtag gctcagatat tatgtctttt
1441 gtggttggaa cagaacaagc agttgcctgc tctctaccac agtcacctga gtacatctat
1501 accatccaca cagctcagcc tgttgaaaat agcacaatac aggaatctgc agccatccag
1561 caagctcatg tcaaactgaa ggagcaccta aatcataatc catctccatc ttcagtagta
1621 tttgtgcagg aagggccacc attcagcaca caccaggtgg atgccaacat aaaatgccag
1681 accagttcac gtgagaatat cttgccgtca gaacagatgg gattcctcat ttcagaaatg
1741 gggcctgcta gcaagcctag tgaagacaca ggtttagcca ctccagccag atacagagag
1801 cacagaagca actcacaaca aggaaagtcc cctgatcttc atctgctggt ggacgtggcc
1861 tgcaagcagg agcgctttcc aaaggaggaa gaattaaaag agtgaggaat ggatgacaaa
1921 tgtgacattg tgcactagct gtagctggag gcagactagc cttgcacatg acaaactgtt
1981 gggatttttt cagttctgtt aaggaaaaaa aagtattttt tgtttcgtta attgagaatt
2041 ttgttaattg agaattggga atttgtatgt actacagtgg ttcagttcag attatctgcc
2101 ttgacaaact actgaacatc tagcagccac gttttttggc tgcccagatc ccttttaaat
2161 gaaaagttct gaccttctgt tatagtcaag gagcatctaa aaactgctcc atctatggta
2221 ctaagaataa tctgtgtgtg tgctgatttg ttgtcttgcc actcaaactg tagtcagcac
2281 aactttagtg gggaattcag tctctctgat tcaagtcgca gtgtgatcct tttagaggag
2341 attgtgtgag aaacaaaggc atgtgaggtc accagcatca caggtctaaa tgcatcagga
2401 attccaggga agaaactctg gagaagagct aattttctaa gtgattaacc aggaaattct
2461 cttacttcct aacccagcat tctgttttaa gagcaaggca tccggacttg gaccatctat
2521 cacacttaac agccccttat tcttttatat taatggaagc attcttctat tttcatatct
2581 ttctttaatt ttaatgatac attatcataa atggtaaaaa gattttatta atatatcact
2641 tatttaaatg tctttaaaga aagtatttaa cttgtttaat ataattgtat ttataaatgc
2701 tgatagattt aaaggtttta aagttttata tttttattat tgcaggatag aaggataaag
2761 gatgcatgtg tagtattttt attttgaaag gaaaatgtac aatgtgtgaa caaaaacatt
2821 aagagattta atatactatt ttcttatttt agatttttac attcaataag tataaattct
2881 catctatata aggtattgtg tgcaaatttg ggaaaaaact gattagcagc catttagtag
2941 aagctatgcc tctgattttt aaagaatggt ttcaatctgg tttaagcttc tgagagaatt
3001 ttggataatg ggatagatgg taacattttt ttcttatccc tgttacagga ttctagattt
3061 gtgcagtagg attgtgggac tgtgttttag gagagaagga tgtcttggat gtccagtttc
3121 tgtggttaat cccttacttg cttatccagt gacagcaaga aactttctga tttaaagtct
3181 ttcaattgac caaaactttc ttattggatt ctgtttcagt tctcctatta agcactgcag
3241 aaacgaaagg aaagcctagg aatatgaaac taattaaaaa ggcacttggt gatatgacat
3301 agtactatgc tagccgttgt ggatgtaaca gttcatttct tatactgcat tgtgccttcc
3361 caatgatgtc aaaccctaga aatattacag agatctactt ttctggaaaa gggtgagctc
3421 tgtattgatc tgcagtgact ctgtttagat attaaagtag gttctgaaaa gcgacctgtg
3481 tggtccctct gattagacta gttaatgtct atgtgatggg catttattta tctttattag
3541 caaggtttaa aagagcaaat tattaagaca cctatatctt ttggccagac tatataatat
3601 tttgtcagag tatgtgaaga ggagacccaa tttccaaatg aaggaacttt gctttttctc
3661 tgtcatgttg aagagctaat atactgtgta gattttcccc taaatatggc tttcttagct
3721 ttatagatgt tgagataata tcttttgagg aacacatgtc aagcaggaac cttggcatag
3781 atttggtttc agttgtttta aggcttaatt aatgaaatgc cttaatcagc tttccaaaca
3841 tttttatata tgaatacagc agaccaagga gctggatctc ctgctatcct tacacgcctt
3901 gtatctatca actaaagctg tcattaatga cttgggcaaa atggcaagag gtataataaa
3961 gtcttcctgt gaattagcca gtagggtctg acacaactag tcaactaaca aggttcctga
4021 ctagtacctc agtatttcag caccttaagc actgataaat ttcaatcagt caacaataaa
4081 gtgagtgttc caactagaaa aaaaaaaaaa aaa
//