LOCUS BC033017 4090 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens heat shock transcription factor family member 5, mRNA
(cDNA clone MGC:26980 IMAGE:4825807), complete cds.
ACCESSION BC033017
VERSION BC033017.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..4090
/db_xref="H-InvDB:HIT000092892"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26980 IMAGE:4825807"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4090
/gene="HSF5"
/gene_synonym="FLJ40311"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
CDS 92..1882
/gene="HSF5"
/gene_synonym="FLJ40311"
/codon_start=1
/product="heat shock transcription factor family member 5"
/protein_id="AAH33017.1"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
/translation="MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQP
LFEAELLSPPGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKP
AGNGPLHHFHNPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSA
SAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPL
KGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSV
HVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYA
HCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVK
VEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPVGSDIMSFVVGTEQAV
ACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLNHNPSPSSVVFVQEGP
PFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLATPARYREHRSN
SQQGKSPDLHLLVDVACKQERFPKEEELKE"
BASE COUNT 1139 a 933 c 885 g 1133 t
ORIGIN
1 agcggggcag ggcgaggcga aggccgggga gggatcgaga acggtgtggg agagctaggc
61 tcggggggcg aggccccggc ccggcggggc gatggaggcg ctgctctcca cccccatcaa
121 ccccaacaac ttccccgcca agctgtggcg cctggtgaac agcccgcgct accgctccat
181 ccgctgggac ggccgcggcg aggggctgct tatcgatcag ccgctcttcg aggccgagct
241 gctcagcccg cccgggccgg ggggcggtgg cgggactgcg ggggccgggg ccgagcccga
301 gctcttcaaa accaccagct tcaccagctt catccgccag ctcaacctct acggcttccg
361 caaggtggtg ctgggcgggc cggggggcgg caaaccggca ggcaatgggc cgctccatca
421 cttccacaac ccgcacttcc gccgcgacca gccacagctg ctcgtgcacc tcaagcgcct
481 caccagcgcc aacaaggcca agctggcggc cggcctggag gtgccctgcc gcccgcccaa
541 ccgcttccag cggctgctca tcacctcggc ctccgccgcc accgcgccac tgcagcacca
601 gcagccgccg ccgcccgcgg ggccccggcc cgagccgcac ggaccagtgg ctgtaggaca
661 atttcaccgg tcatttcgtc gagatagttt gtctccttac tcctgtgtat caactccatc
721 ccacgaccac agtacttacc ctctgaaagg tttagatcgg accccagttc ctcatagaat
781 atggcagaac tcccttggaa tgcatcctgg acaagtggag acatctccca cattttcaga
841 taaaggggtt ccgtttcctg tactccagag gtttccaact gaggttacct atacactgca
901 gcccagcacc acatctgtac atgttcaaca aggtcctcaa acaatggtca gctcctccca
961 aaaatacagt aactacacac cctcagcaca gtactcgcaa gcctactatc caacagctgt
1021 gctacagtgc tgttctccta cccacatgga tgctctaagt agttgtgtca ctcccactgc
1081 ctcttcctat gcacactgca actacttcca gaatccttca atgcagtcct cctatccagt
1141 tgaatttttg ccttccaatt ggccctgcag tactactgat gaaaatacaa agacagaagt
1201 aaacctagag gctgtctttc agatagttga tgagttgcat tcctccccta aattggagat
1261 ggtaaaggtg gagcctgttg agaatcagtg cccaacatct ccgtcttaca gaggccaaca
1321 cattttagct aattctaaca acagcaatcc atgttctgca agtcaggcta gccagctgga
1381 gccacttact cctgtaggct cagatattat gtcttttgtg gttggaacag aacaagcagt
1441 tgcctgctct ctaccacagt cacctgagta catctatacc atccacacag ctcagcctgt
1501 tgaaaatagc acaatacagg aatctgcagc catccagcaa gctcatgtca aactgaagga
1561 gcacctaaat cataatccat ctccatcttc agtagtattt gtgcaggaag ggccaccatt
1621 cagcacacac caggtggatg ccaacataaa atgccagacc agttcacgtg agaatatctt
1681 gccgtcagaa cagatgggat tcctcatttc agaaatgggg cctgctagca agcctagtga
1741 agacacaggt ttagccactc cagccagata cagagagcac agaagcaact cacaacaagg
1801 aaagtcccct gatcttcatc tgctggtgga cgtggcctgc aagcaggagc gctttccaaa
1861 ggaggaagaa ttaaaagagt gaggaatgga tgacaaatgt gacattgtgc actagctgta
1921 gctggaggca gactagcctt gcacatgaca aactgttggg attttttcag ttctgttaag
1981 gaaaaaaaag tattttttgt ttcgttaatt gagaattttg ttaattgaga attgggaatt
2041 tgtatgtact acagtggttc agttcagatt atctgccttg acaaactact gaacatctag
2101 cagccacgtt ttttggctgc ccagatccct tttaaatgaa aagttctgac cttctgttat
2161 agtcaaggag catctaaaaa ctgctccatc tatggtacta agaataatct gtgtgtgtgc
2221 tgatttgttg tcttgccact caaactgtag tcagcacaac tttagtgggg aattcagtct
2281 ctctgattca agtcacagtg tgatcctttt agaggagatt gtgtgagaaa caaaggcatg
2341 tgaggtcacc agcatcacag gtctaaatgc atcaggaatt ccagggaaga aactctggag
2401 aagagctaat tttctaagtg attaaccagg aaattctctt acttcctaac ccagcattct
2461 gttttaagag caaggcatcc ggacttggac catctatcac acttaacagc ccctgattct
2521 tttatattaa tggaagcatt cttctatttt catatctttc tttaatttta atgatacatt
2581 atcataaatg gtaaaaagat tttattaata tatcacttat ttaaatgtct ttaaagaaag
2641 tatttaactt gtttaatata attgtattta taaatgctga tagatttaaa ggttttaaag
2701 ttttatattt ttattattgc aggatagaag gataaaggat gcatgtgtag tatttttatt
2761 ttgaaaggaa aatgtacaat gtgtgaacaa aaacattaag agatttaata tactattttc
2821 ttattttaga tttttacatt caataagtat aaattctcat ctatataagg tattgtgtgc
2881 aaatttggga aaaaactgat tagcagccat ttagtagaag ctatgcctct gatttttaaa
2941 gaatggtttc aatctggttt aagcttctga gagaattttg gataatggga tagatggtaa
3001 catttttttc ttatccctgt tacaggattc tagatttgtg cagtaggatt gtgggactgt
3061 gttttaggag agaaggatgt cttggatgtc cagtttctgt ggttaatccc ttacttgctt
3121 atccagtgac agcaagaaac tttctgattt aaagtctttc aattgaccaa aactttctta
3181 ttggattctg tttcagttct cctattaagc actgcagaaa cgaaaggaaa gcctaggaat
3241 atgaaactaa ttaaaaaggc acttggtgat atgacatagt actatgctag ccgttgtgga
3301 tgtaacagtt catttcttat actgcattgt gccttcccaa tgatgtcaaa ccctagaaat
3361 attacagaga tctacttttc tggaaaaggg tgagctctgt attgatctgc agtgactctg
3421 tttagatatt aaagtaggtt ctgaaaagcg acctgtgtgg tccctctgat tagactagtt
3481 aatgtctatg tgatgggcat ttatttatct ttattagcaa ggtttaaaag agcaaattat
3541 caagacacct atatcttttg gccagactat ataatatttt gtcagagtat gtgaagagga
3601 gacccaattt ccaaatgaag gaactttgct ttttctctgt catgttgaag agctaatata
3661 ctgtgtagat tttcccctaa atatggcttt cttagcttta tagatgttga gataatatct
3721 tttgaggaac acatgtcaag caggaacctt ggcatagatt tggtttcagt tgttttaagg
3781 cttaattaat gaaatgcctt aatcagcttt ccaaacattt ttatatatga atacagcaga
3841 ccaaggagct ggatctcctg ctatccttac acgccttgta tctatcaact aaagctgtca
3901 ttaatgactt gggcaaaatg gcaagaggta taataaagtc ttcctgtgaa ttagccagta
3961 gggtctgaca caactagtca actaacaagg ttcctgacta gtacctcagt atttcagcac
4021 cttaagcact gataaatttc aatcagtcaa caataaagtg agtgttccaa ctagaaaaaa
4081 aaaaaaaaaa
//