LOCUS BC033000 3453 bp mRNA linear HUM 30-JUL-2005 DEFINITION Homo sapiens tetratricopeptide repeat domain 17, mRNA (cDNA clone MGC:26168 IMAGE:4830377), complete cds. ACCESSION BC033000 VERSION BC033000.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3453) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3453) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: i Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41055004. FEATURES Location/Qualifiers source 1..3453 /db_xref="H-InvDB:HIT000041753" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26168 IMAGE:4830377" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3453 /gene="TTC17" /gene_synonym="FLJ10890" /db_xref="GeneID:55761" CDS 17..2887 /gene="TTC17" /gene_synonym="FLJ10890" /codon_start=1 /product="TTC17 protein" /protein_id="AAH33000.1" /db_xref="GeneID:55761" /translation="MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVV TEDGKIQQQVDSPMNLKHPHDLVILMRQEATVNYLKELEKQLVAQKIHIEENEDRDTG LEQRHNKEDPDCIKAKVPLGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDC TKILELPYSIHAFQHLRGVQERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEG LQKNTSSWVLYNMASFYWRIKNEPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAH FSADAAVVVHAALDDSDFFTSYYTLGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKR KHAVLCQQKLEQKLEAQHRSLQRTLNELKEYQKQHDHYLRQQEILEKHKLIQEEQILR NIIHETQMAKEAQLGNHQICRLVNQQHSLHCQWDQPVRYHRGDIFENVDYVQFGEDSS TSSMMSVNFDVQSNQSDINDSVKSSPVAHSILWIWGRDSDAYRDKQHILWPKRADCTE SYPRVPVGGELPTYFLPPENKGLRIHELSSDDYSTEEEAQTPDCSITDFRKSHTLSYL VKELEVRMDLKAKMPDDHARKILLSRINNYTIPEEEIGSFLFHAINKPNAPIWLILNE AGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVNLANLLIHYGLHLDATKLLLQAL AINSSEPLTFLSLGNAYLALKNISGALEAFRQALKLTTKCPECENSLKLIRCMQFYPF LYNITSSVCSGNCHEKTLDNSHDKQKYFDNSQSLDAAEEEPSERGTGEDPVFSVENSG RDSDALRLESTVVEESNGSDEMENSDETKMSEEILALVDEFQQAWPLEGFGGALEMKG RRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITFQVKRVKKPKGDHKKTPG KKVETGQIENGHRYQANLEITGPKVASPGPQGLLDWKTRKVP" BASE COUNT 1024 a 771 c 770 g 888 t ORIGIN 1 agcggggggg ggcaagatgg cggcggcagt aggggttcgt ggccggtacg agctgccgcc 61 ttgctccggc ccaggctggc tcctcagcct ttccgccttg ctgagtgtgg cggcacgagg 121 ggccttcgcc accacgcact gggtcgtcac ggaggacggg aaaatccagc agcaggtgga 181 ttcaccaatg aacttgaagc atcctcatga cctagtcata ttaatgagac aagaagcaac 241 agttaactac ctcaaagaat tagagaaaca attagttgct caaaaaattc acatagaaga 301 gaatgaggac agagacacag gactggaaca gagacataat aaagaagacc cagactgcat 361 caaagccaag gtgcccttag gggacctgga tctatatgat ggcacataca taactttgga 421 gagcaaagac atcagtcctg aagattatat agacacagaa tctcctgtcc ctccagaccc 481 agagcaacct gattgtacta aaattctaga acttccatat agtatacatg cttttcagca 541 cttgagaggt gtacaggaga gagttaatct ttctgcacct ctgctaccta aagaagaccc 601 aatcttcaca tatttatcta aacggttagg aaggagtata gatgacatag gtcacctcat 661 tcatgaaggc ctacagaaga acacttcctc gtgggtactg tataacatgg cttcatttta 721 ctggagaatt aagaatgagc catatcaggt agtagaatgt gccatgcgag cacttcactt 781 ctcttccagg cacaataaag acattgccct ggtcaacctg gcaaacgttc tacacagagc 841 acacttctct gctgatgctg ctgtcgtggt ccatgcagct ctggatgaca gtgacttctt 901 caccagctat tacactttgg ggaatatata tgcaatgctt ggggaatata accactcagt 961 gctctgttat gaccacgctt tgcaggccag acctgggttt gagcaagcta taaagaggaa 1021 gcatgctgtc ctatgtcagc aaaaactgga gcagaaattg gaggctcagc atagatctct 1081 ccagcgaaca ctgaatgagt taaaagagta tcaaaagcag catgaccact acctgagaca 1141 gcaggaaatc ctagaaaaac ataaactgat tcaggaggag caaatcttaa gaaatatcat 1201 tcatgagact cagatggcaa aagaggcaca attaggaaat catcagatat gccgactggt 1261 caaccagcag catagtttac attgccagtg ggaccagcct gtacgctatc atcgtggaga 1321 tatctttgaa aatgtggact atgttcagtt tggtgaggat tcatcaacct ccagtatgat 1381 gtctgtgaac tttgatgttc aatcaaatca gagtgatatc aatgattcgg tcaagtcttc 1441 tcccgtagcc cattctattc tctggatttg gggcagggac tctgatgcat atagggacaa 1501 acagcatatt ctatggccta aaagagcaga ttgtacagaa agctacccta gagtccctgt 1561 tggtggggaa ttgccaacgt attttctgcc tccggaaaac aaaggactca ggatccacga 1621 actcagcagt gatgattatt ctacagaaga agaggcccaa acccctgact gttccataac 1681 tgacttcaga aaaagccaca ctctgtccta cttagtcaaa gaattagagg ttcgcatgga 1741 tctgaaagcc aaaatgccag atgaccatgc acgaaaaatt ttgctttccc gtattaataa 1801 ctatactatc ccagaagaag aaattgggtc tttcttattt catgctatta ataagccaaa 1861 tgctcctatc tggctcatac tcaatgaagc tggactatac tggagagcag taggaaatag 1921 cacttttgct attgcctgtc ttcagagggc tttgaattta gctccacttc aataccaaga 1981 tgttcctctt gtcaacttgg ccaacctttt gattcattac ggccttcatc ttgatgccac 2041 taagctgcta cttcaagctt tggccatcaa tagctctgag cctctgacct ttttgagcct 2101 gggaaatgct taccttgctc tgaagaatat cagtggggca cttgaggcct ttagacaggc 2161 cttgaaatta accaccaaat gtccagagtg tgaaaacagc ctgaagttga tccgctgtat 2221 gcagttttat ccttttctgt acaacatcac ttcttctgtt tgcagtggta attgtcatga 2281 gaaaaccctg gacaacagcc atgacaaaca gaaatatttt gacaactcac agtcactgga 2341 tgctgctgaa gaagagccct ctgagagagg aacaggggag gaccctgtat tctctgttga 2401 gaattcaggg agggactcag atgcccttag acttgaaagt acggtggttg aggagagcaa 2461 tggttctgat gagatggaga attcagatga aaccaaaatg tcagaagaaa tactggcttt 2521 ggtggatgaa tttcaacagg catggccttt ggaaggcttt gggggtgcac tagagatgaa 2581 agggcggcgt ctagacttac aaggaatacg ggtgctgaag aaaggtcccc aggatggagt 2641 ggccagaagc tcttgctatg gagactgcag aagtgaagat gatgaagcaa cagaatggat 2701 tacattccag gtcaaacgtg taaagaaacc caaaggagat cataagaaaa ctcctgggaa 2761 aaaagtagaa acaggtcaga tagaaaatgg acatcgttac caagcaaacc tagagatcac 2821 tggccccaag gtggcatctc ctgggccaca agggctacta gactggaaga ccaggaaagt 2881 gccatagaca taatgtaact ggatttcagc aaggcattta acagagcctc ttatgatatc 2941 cttgtgaacc agatggagag atgtgggctt gaagccttcc cattgcctac aggataaaat 3001 tcaaacttcc tagtgtggtg tacaagaccc tttacagccc gcctctgtgt acccttcaac 3061 accattctct gaaccaacca tgctcatgtt tttacctcag tgcctttgca catgctattc 3121 cctctgcctg gaatgccctg tgccccctct gccctctgcc gtgctaaaat atcactcatc 3181 cttaaacttc aaaatcaagt gccatctctt ccttgttacc ttcaggcaga attagttact 3241 ctttcctctg tgcaattgtt ctatatcttc gctctagctc ttttcctgtt gtattgtaat 3301 gatttgttta tgtttacctt ccttactaga ctgtgagctc aagagcaggc cgtcttaatt 3361 attcctttct gtacccctag tgtcttttat ggttctcagc cccttataac aggtgctcaa 3421 taaatatttt tcaaatgaaa aaaaaaaaaa aaa //