LOCUS BC032957 907 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 111, mRNA (cDNA clone
MGC:33651 IMAGE:4827863), complete cds.
ACCESSION BC032957
VERSION BC032957.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 907)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 907)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698991.
FEATURES Location/Qualifiers
source 1..907
/db_xref="H-InvDB:HIT000041749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33651 IMAGE:4827863"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..907
/gene="C1orf111"
/gene_synonym="HSD20"
/gene_synonym="RP11-565P22.3"
/db_xref="GeneID:284680"
/db_xref="HGNC:HGNC:27648"
CDS 72..857
/gene="C1orf111"
/gene_synonym="HSD20"
/gene_synonym="RP11-565P22.3"
/codon_start=1
/product="chromosome 1 open reading frame 111"
/protein_id="AAH32957.1"
/db_xref="GeneID:284680"
/db_xref="HGNC:HGNC:27648"
/translation="MENFSLLSISGPPISSSALSAFPDIMFSRATSLPDIAKTAVPTE
ASSPAQALPPQYQSIIVRQGIQNTVLSPDCSLGDTQHGEKLRRNCTIYRPWFSPYSYF
VCADKESQLEAYDFPEVQQDEGKWDNCLSEDMAENICSSSSSPENTCPREATKKSRHG
LDSITSQDILMASRWHPAQQNGYKCVACCRMYPTLDFLKSHIKRGFREGFSCKVYYHK
LKALWSKEQKARLGDRLSSGSCQAFNSPAEHLRQIGGEAYLCL"
BASE COUNT 234 a 280 c 223 g 170 t
ORIGIN
1 agcgtcggga caaaccagcc agcctctcca gagcaggcgt gtgatctctg tacccccgca
61 gtggtcagaa tatggagaac ttctcactcc tcagcatctc tggacctcca atctcttcct
121 ccgccctgag tgcttttccc gacattatgt tctctcgtgc caccagcctg ccagacattg
181 caaagacagc agtacccact gaggcatcca gcccagctca ggccctgcca ccccagtacc
241 aaagcatcat tgtcaggcaa gggatacaga acacagtgct ctcaccagac tgcagcttgg
301 gggacaccca gcacggagag aagctgaggc ggaactgcac tatctaccgg ccctggttct
361 ccccctacag ctacttcgtg tgtgcagaca aagagagcca gctggaggcc tatgacttcc
421 cagaggtgca gcaggatgag ggcaagtggg acaactgcct ttctgaggac atggctgaga
481 acatctgttc gtcctcttcc tccccagaga acacttgccc tcgagaagcc accaagaaat
541 ccaggcatgg cctggactcc atcacatccc aggacatcct aatggcttcc agatggcacc
601 cagcacagca gaatggctac aagtgcgtgg cctgctgccg catgtacccc accctggact
661 tcctcaagag ccacatcaag aggggcttca gggagggctt cagctgcaag gtgtactacc
721 acaagctcaa agccctctgg agcaaggagc agaaggcccg gctgggagac aggctctcct
781 ccggcagctg ccaggccttc aatagtcctg ctgaacacct taggcaaatt ggcggtgaag
841 cctacttatg tctctagaga gatgccaata aagttagtca cagccttcaa gaaaaaaaaa
901 aaaaaaa
//