LOCUS BC032947 1472 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens myotubularin related protein 1, mRNA (cDNA clone
MGC:33194 IMAGE:4837744), complete cds.
ACCESSION BC032947
VERSION BC032947.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1472)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1472)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872762.
FEATURES Location/Qualifiers
source 1..1472
/db_xref="H-InvDB:HIT000041744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33194 IMAGE:4837744"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1472
/gene="MTMR1"
/db_xref="GeneID:8776"
/db_xref="MIM:300171"
CDS 165..1256
/gene="MTMR1"
/codon_start=1
/product="MTMR1 protein"
/protein_id="AAH32947.1"
/db_xref="GeneID:8776"
/db_xref="MIM:300171"
/translation="MDRPAAAAAAGCEGGGGPNPGPAGGRRPPRAAGGATAGSRQPSV
ETLDSPTGSHVEWCKQLIAATISSQISGSVTSENVSRDYKALRDGNKLAQMEEAPLFP
GESIKAIVKDVMYICPFMGAVSGTLTVTDFKLYFKNVERDPHFILDVPLGVISRVEKI
GAQSHGDNSCGIEIVCKDMRNLRLAYKQEEQSKLGIFENLNKHAFPLSNGQALFAFSY
KEKFPINGWKVYDPVSEYKRQGLPNESWKISKINSNYEFCDTYPAIIVVPTSVKDDDL
SKVAAFRAKGRVPVLSWIHPESQATITRCSQPLVGPNDKRCKEDEKYLQTIMDANAQS
HKLIIFDARQNSVADTNKLWYQDTASLME"
BASE COUNT 416 a 337 c 387 g 332 t
ORIGIN
1 agcggggggg taacgcgggg ccgccaggtg acagctaatg gcggcggccg cctgaggcgg
61 gcgggcggta tagagcgggc ggcaggaggc aagcagcgaa accttcccgg ccgccgctcc
121 cgtcccgacg gcggcttccc caaggcggca ggactcggcg cgccatggac aggccggcgg
181 cggcggcggc ggcgggctgc gagggcggcg ggggcccgaa cccggggccg gcgggcggca
241 ggaggcctcc tcgggccgcg gggggcgcca ccgccggctc ccggcagccc agcgtggaga
301 ccctggacag tcccacagga tcacatgttg aatggtgtaa acagcttata gctgctacaa
361 tttctagtca gatttcaggt tcagtgacat cagaaaatgt gtccagagat tacaaggctc
421 taagggatgg aaataagctg gcacagatgg aagaggctcc acttttccca ggagaatcaa
481 ttaaagccat tgtgaaagat gtcatgtata tctgcccatt tatgggagca gtgagtggaa
541 ccctgacagt gacggacttt aagctgtact tcaaaaatgt cgagagggac ccgcatttta
601 tccttgatgt tccccttgga gtgatcagca gagtggagaa gattggagca cagagccatg
661 gagacaattc ctgtggtata gagatagtgt gcaaggatat gaggaacttg cggcttgctt
721 ataaacagga agaacagagt aaactaggga tatttgaaaa cctcaacaaa catgcatttc
781 ctctttctaa cggacaggca ctatttgcat tcagctataa agaaaaattt ccaattaatg
841 gctggaaagt ttatgatcca gtatctgaat ataagagaca gggcttgcca aatgagagtt
901 ggaaaatatc caaaataaac agtaattatg agttctgtga cacctaccct gccatcattg
961 ttgtgccaac tagtgtaaaa gatgatgacc tttcaaaagt ggcagctttt cgagcaaaag
1021 gcagagtccc tgtgttgtca tggattcatc cggaaagtca agcaacgatt acccgttgca
1081 gccagccact tgtgggtccc aatgataagc gctgcaaaga ggatgaaaaa tacttgcaaa
1141 caataatgga tgctaacgca cagtcacaca agcttatcat ctttgatgct cgacaaaaca
1201 gtgtcgctga taccaacaag ctttggtatc aggatacagc tagcctcatg gaatgaacta
1261 ggaagtatgc cctcctcttc tagtttttgg atgacccatc atctcttacc tcacctacag
1321 caggaacctt gaaattggac ttctgcctca caccctgcaa tctcatctcc acattatgac
1381 cagagtgatc ttcttttttt aaaaaaactt attgttacta tttcaattga taaatgaatt
1441 gtatatattt atggtgcaaa aaaaaaaaaa aa
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