LOCUS BC032940 3336 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens lysosomal-associated membrane protein 3, mRNA (cDNA clone MGC:26448 IMAGE:4829125), complete cds. ACCESSION BC032940 VERSION BC032940.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3336) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3336) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC032940.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: f Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38455384. FEATURES Location/Qualifiers source 1..3336 /db_xref="H-InvDB:HIT000041740" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26448 IMAGE:4829125" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3336 /gene="LAMP3" /gene_synonym="CD208" /gene_synonym="DC-LAMP" /gene_synonym="DCLAMP" /gene_synonym="LAMP" /gene_synonym="TSC403" /db_xref="GeneID:27074" /db_xref="HGNC:HGNC:14582" /db_xref="MIM:605883" CDS 181..1431 /gene="LAMP3" /gene_synonym="CD208" /gene_synonym="DC-LAMP" /gene_synonym="DCLAMP" /gene_synonym="LAMP" /gene_synonym="TSC403" /codon_start=1 /product="lysosomal-associated membrane protein 3" /protein_id="AAH32940.1" /db_xref="GeneID:27074" /db_xref="HGNC:HGNC:14582" /db_xref="MIM:605883" /translation="MPRQLSAAAALFASLAVILHDGSQMRAKAFPGTRDYSQPTAAAT VQDIKKPVQQPAKQAPHQTLAARFMDGHITFQTAATVKIPTTTPATTKNTATTSPITY TLVTTQATPNNSHTAPPVTEVTVGPSLAPYSLPPTITPPAHTTGTSSSTVSHTTGNTT QPSNQTTLPATLSIALHKSTTGQKPVQPTHAPGTTAAAHNTTRTAAPASTVPGPTLAP QPSSVKTGIYQVLNGSRLCIKAEMGIQLIVQDKESVFSPRRYFNIDPNATQASGNCGT RKSNLLLNFQGGFVNLTFTKDEESYYISEVGAYLTVSDPETVYQGIKHAVVMFQTAVG HSFKCVSEQSLQLSAHLQVKTTDVQLQAFDFEDDHFGNVDECSSDYTIVLPVIGAIVV GLCLMGMGVYKIRLRCQSSGYQRI" BASE COUNT 964 a 801 c 660 g 911 t ORIGIN 1 gtgggggtag gagggggccg gcggagtttc cctccccgcc cagcggccct gggcgggctt 61 ttcggctgct tctcataagc aggtggtttc gtttctccgg cacaggtagg tttctctggc 121 accgattcgg ggcctgcccg gacttcgccg cacgctgcag aacctcgccc agcgcccacc 181 atgccccggc agctcagcgc ggcggccgcg ctcttcgcgt ccctggccgt aattttgcac 241 gatggcagtc aaatgagagc aaaagcattt ccaggaacca gagattattc tcaacctact 301 gcagcagcaa cagtacagga cataaaaaaa cctgtccagc aaccagctaa gcaagcacct 361 caccaaactt tagcagcaag attcatggat ggtcatatca cctttcaaac agcggccaca 421 gtaaaaattc caacaactac cccagcaact acaaaaaaca ctgcaaccac cagcccaatt 481 acctacaccc tggtcacaac ccaggccaca cccaacaact cacacacagc tcctccagtt 541 actgaagtta cagtcggccc tagcttagcc ccttattcac tgccacccac catcacccca 601 ccagctcata caactggaac cagttcatca accgtcagcc acacaactgg gaacaccact 661 caacccagta accagaccac ccttccagca actttatcga tagcactgca caaaagcaca 721 accggtcaga agcctgttca acccacccat gccccaggaa caacggcagc tgcccacaat 781 accacccgca cagctgcacc tgcctccacg gttcctgggc ccacccttgc acctcagcca 841 tcgtcagtca agactggaat ttatcaggtt ctaaacggaa gcagactctg tataaaagca 901 gagatgggga tacagctgat tgttcaagac aaggagtcgg ttttttcacc tcggagatac 961 ttcaacatcg accccaacgc aacgcaagcc tctgggaact gtggcacccg aaaatccaac 1021 cttctgttga attttcaggg cggatttgtg aatctcacat ttaccaagga tgaagaatca 1081 tattatatca gtgaagtggg agcctatttg accgtctcag atccagagac agtttaccaa 1141 ggaatcaaac atgcggtggt gatgttccag acagcagtcg ggcattcctt caagtgcgtg 1201 agtgaacaga gcctccagtt gtcagcccac ctgcaggtga aaacaaccga tgtccaactt 1261 caagcctttg attttgaaga tgaccacttt ggaaatgtgg atgagtgctc gtctgactac 1321 acaattgtgc ttcctgtgat tggggccatc gtggttggtc tctgccttat gggtatgggt 1381 gtctataaaa tccgcctaag gtgtcaatca tctggatacc agagaatcta attgttgccc 1441 ggggggaatg aaaataatgg aatttagaga actctttcat cccttccagg atggatgttg 1501 ggaaattccc tcagagtgtg ggtccttcaa acaatgtaaa ccaccatctt ctattcaaat 1561 gaagtgagtc atgtgtgatt taagttcagg cagcacatca atttctaaat actttttgtt 1621 tattttatga aagatatagt gagctgttta ttttctagtt tcctttagaa tattttagcc 1681 actcaaagtc aacatttgag atatgttgaa ttaacataat atatgtaaag tagaataagc 1741 cttcaaatta taaaccaagg gtcaattgta actaatacta ctgtgtgtgc attgaagatt 1801 ttattttacc cttgatctta acaaagcctt tgctttgtta tcaaatggac tttcagtgct 1861 tttactatct gtgttttatg gtttcatgta acatacatat tcctggtgta gcacttaact 1921 ccttttccac tttaaatttg tttttgtttt ttgagacgga gtttcactct tgtcacccag 1981 gctggagtac agtggcacga tctcggctta tggcaacctc cgcctcccgg gttcaagtga 2041 ttctcgtgct tcagcttccc gagtagctgg gattacaggc acacactacc acgcctggct 2101 aatttttgta tttttattat agacggggtt tcaccatgtt ggccagactg gtcttgaact 2161 cttgacctca ggtgatccac ccacctcagc ctcccaaagt gctgggatta caggcatgag 2221 ccattgcgcc cggccttaaa tgtttttttt taatcatcaa aaagaacaac atatctcagg 2281 ttgtctaagt gtttttatgt aaaaccaaca aaaagaacaa atcagcttat attttttatc 2341 ttgatgactc ctgctccaga atcgctagac taagaattag gtgtctacag atggtagaac 2401 taaacaataa gcaagagaca ataataatgg cccttaatta ttaacaaagt gccagagtct 2461 aggctaagca ctttatctat atctcatttc attctcacaa cttataggtg aatgagtaaa 2521 ctgagactta agggaactga atcacttaaa tgtcacctgg ctaactgatg gcagagccag 2581 agcttgaatt catgttggtc tgacatcaag gtctttggtc ttctccctac accaagttac 2641 ctacaagaac aatgacacca cactctgcct gaaggctcac acctcatacc agcatacgct 2701 caccttacag ggaaatgggt ttatccagga tcatgagaca ttagggtaga tgaaaggaga 2761 gctttgcaga taacaaaata gcctatcctt aataaatcct ccactctctg gagggagact 2821 gaggggcttt gtaaaacatt agtcagttgc tcatttttat gggattgctt agctgggctg 2881 taaagatgaa ggcatcaaat aaactcaaag tatttttaaa tttttttgat aatagagaaa 2941 cttcgctaac caactgttct ttcttgagtg tatagcccca tcttgtggta acttgctgct 3001 tctgcacttc atatccatat ttcctattgt tcactttatt ctgtagagca gcctgccaag 3061 aattttattt ctgctgtttt ttttgctgct aaagaaagga actaagtcag gatgttaaca 3121 gaaaagtcca cataacccta gaattcttag tcaaggaata attcaagtca gcctagagac 3181 catgttgact ttcctcatgt gtttccttat gactcagtaa gttggcaagg tcctgacttt 3241 agtcttaata aaacattgaa ttgtagtaaa ggtttttgta ataaaaactt actttggaaa 3301 aaaaaaaaaa aaaaaaaaat aaaaaaaaaa aaaaaa //