LOCUS BC032939 3840 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:4827731, with apparent retained
intron.
ACCESSION BC032939
VERSION BC032939.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3840)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3840)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: c Column: 3
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3840
/db_xref="H-InvDB:HIT000092876"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4827731"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1199 a 739 c 895 g 1007 t
ORIGIN
1 agcggaactg gagcaatcag agcaccgcag ccagggagat gctggcgaga cgacagcgag
61 atcctctcca ggccctgcgg cgccgcaatc aggagctgaa gcaacaggtt gatagtttgc
121 tttctgagag ccaactgaaa gaagctctag aacccaataa aagacaacat atttatcaaa
181 gatgtatcca gttaaagcag gcaatagatg aaaataaaaa tgctcttcaa aaattaagca
241 aagctgatga atctgcacct gttgcaaact ataatcagag aaaagaagag gagcatactc
301 ttttggacaa gcttacccaa caactgcagg gccttgctgt gacaataagc agagaaaata
361 taactgaagt tggggcacct actgaagaag aggaagaaag tgaaagtgaa gatagtgaag
421 acattggtgg ggaggaagaa gatgcagagg aggaagagga agagaaagag gaaaatgaat
481 ctcacaaatg gtcaaccggt gaagaataca tcgctgttgg agattttact gctcagcaag
541 ttggagatct tacatttaag aaaggggaaa ttctccttgt aattgaaaaa aaacctgatg
601 gttggtggat agctaaggat gccaaaggaa atgaaggtct tgttcccaga acctacctag
661 agccttatag tgaagaagaa gaaggccaag agtcaagtga agagggcagt gaagaagatg
721 tagaggcggt ggatgaaaca gcagatggag cagaagttaa gcatagaact gatcaccact
781 ggagtgctgt tcagaaagcg atttcagagg cgggcatctt ctgtcttgtt aatcatgtct
841 cgttttgcta cctaatagtt ctgatgcgaa ataggatgga gactgtggaa gacaccaatg
901 gatctgaaac agggttcagg gcatggaatg tacagagcag aggacgtata tttctggttt
961 ctaagcctgt gctccaagta acatttctca ttagtttttt tttttttttt gtacaaaaag
1021 aatagataat tcatggtgtc acttgaggac ttggaaacat tctcattgat cctgctttcc
1081 tatcatttga gtggaaacag atgttaaatt ttatttacta ttcgaaaaat cctgaaagcc
1141 tttaataaaa agtaagaaat tggccaggca tggtgattca cactggtaat cccaacattt
1201 tgggaagctg aagcaggagg atcacttgag gccaggaatt caagaccagc ttgagcaaca
1261 tagtgagacc ctatcctaca aaaaataaga aaaattagcc aggtgtggtg gctcatgcct
1321 gtagtcccag ctactcggga ggctgaggtg ggaggattgc atgagtttgg gaagtcaagg
1381 ctgtagtgag ctgtgattgt gccactgcac tccagagcat gagtgacagg gcaagaccct
1441 gtcttaaaaa aaaaaaagta attaattaca tttttttaaa ggagaaatga tccataattc
1501 tgtcattaaa aaaaaattac aggccgggca cagtggctca tgggcacagt ggctcacacc
1561 tgtaatccca gcactttggg aggccaaggc gggtggatca cctggggtca agagttcaag
1621 accagcctag tcaacacagc gaaacctcac ctcgactaaa aatagaaaaa ttagctgggc
1681 gtggtagcgc atgtctgtag tcccagctcc tggggaggct gaggcaggag aattgcttga
1741 acctgggagg cggaggttgc agtgagccga gaatactcca ctgtactcca gcctgggcga
1801 cagagtgaga ctccgtctca aaaaacaaaa aaataattac atagccaaat gaaaattctc
1861 ttcctcaaac tcataagtaa tcaccattaa caatttagta cgtgtccttc ctgacctttt
1921 tcgttattta ttacttataa gtacatcctt gtatgtgtga gggtgtgtgt ctatgagtag
1981 tgtgtatgtg tatacaaaaa aaatccatta attcttcagt gcatgtgatt tgccaataga
2041 cattaactta cctgtgaaat ggaagcgcag ggtggagcag gacaggagca gggacatttt
2101 gataagggta tacttgaagc agctgctccg gaacacacag ctctgcacgc tgggcactgt
2161 atggggctta ggtccttagg agaggccagg gtgctgtgat ggcatcctct caggaatttg
2221 gggccaaatc gtattattct tccactaaag tctgtatgtt tatatttttc ttttttgggt
2281 tatagttact ctagtgataa agtattatag agatgcagaa acatgactga aaacaaatcc
2341 attttgatgt tactgtcttc agcagataaa cactgttgat gtgttaacta cgatgggagc
2401 tattcctgca gggttcaggc cttccacgct ctcacagctt ctggaggaag ggaatcaatt
2461 tcgagcaaat tacttcttac aaccagagct catgccttca caactggcct tcagagatct
2521 gatgtgggat gctacagaag gcactattag gtcgagacca agtcgtattt cattgattct
2581 gacattatgg agctgtaaaa tgattcctct tccaggaatg agcatacagg ttctcagcag
2641 acatgtacgc ctctgtctat ttgatggtaa taaggttctg agcaacattc atacagtcag
2701 agccacatgg caacctaaag cccaaaacat ggaccttttc tccccaggtt actcgcatct
2761 taccatgttt gcttgatggt gattgcttta tcaggtctaa ttctgcatct ccagatcttg
2821 gaatattatt tgaacttgga atttcttata ttcgcaattc aactggtgaa agaggagagt
2881 taagctgtgg ctgggtgttt cttaaacttt ttgatgccag tggagttcct attccagcaa
2941 aaacttatga gcttttcttg aatggtggta ctccttatga aaaaggtatt gaagtggacc
3001 cttcaatatc cagaagagca cacggcagtg ttttctacca gattatgaca atgagaaggc
3061 agcctcaact tctagtgaaa ctgagatcct tgaacagaag atcaagaaat gtactaagtc
3121 tactgccaga aacattaatt ggaaatatgt gttctattca cttgttgata ttttatcgac
3181 aaattcttgg agatgtgctc ctgaaagaca ggatgagctt gcaaagtact gatttaatta
3241 gccatcccat gctggccacc ttccccatgc tcttggagca gcctgatgtg atggatgctc
3301 tcaggagttc gtgggctgga aaagaaagca cattaaaaag atcagagaag agagacaaag
3361 agttcctgaa gtccacgttt ctcctggttt accatgactg cgtgctccca cttctccact
3421 ccacacgcct acccccattc aggtgggcag aagaagagac tgagactgca cggtggaaag
3481 ttatcactga cttccttaag caaaaccaag aaaaccaggg cgccctccaa gctctgctgt
3541 caccagacgg agttcatgaa ccttttgacc tttcagagca gacctatgac ttcttgggtg
3601 aaatgagaaa gaatgcagtg tgacagtggc agcctctagc cctcagcttc ccacggaatc
3661 agatggatcc tccacgatta cgtgaataaa atgatggaac caaaaatcac tgtcacttta
3721 caacttaggt tttactcttt tctttctaca gaccatattt ttaaagaaat gtttatacaa
3781 taatttaaat attttttaaa accataaaat aaatttttat aaggaaaaaa aaaaaaaaaa
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