LOCUS BC032919 2311 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 1, mRNA (cDNA clone MGC:39165 IMAGE:5427174), complete cds. ACCESSION BC032919 VERSION BC032919.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2311) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2311) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: n Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42476029. FEATURES Location/Qualifiers source 1..2311 /db_xref="H-InvDB:HIT000041739" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39165 IMAGE:5427174" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2311 /gene="OGFOD1" /gene_synonym="FLJ10826" /gene_synonym="KIAA1612" /db_xref="GeneID:55239" /db_xref="HGNC:HGNC:25585" CDS 73..1701 /gene="OGFOD1" /gene_synonym="FLJ10826" /gene_synonym="KIAA1612" /codon_start=1 /product="2-oxoglutarate and iron-dependent oxygenase domain containing 1" /protein_id="AAH32919.1" /db_xref="GeneID:55239" /db_xref="HGNC:HGNC:25585" /translation="MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWS RRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSD DLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE GRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFH QVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLD MDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEE SKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGT SHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLI HDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYRDRE TLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE" BASE COUNT 674 a 495 c 513 g 629 t ORIGIN 1 gccgggagtt gcagtaccct caggaaggta gcgtcttgat ctgcgtggcg tggttctgtg 61 ccttgggaag agatgaatgg gaagcggcca gcggagcccg gcccagcccg ggtgggaaaa 121 aagggaaaga aggaggtgat ggcggagttt tcggacgctg ttacggaaga aaccttgaaa 181 aagcaggtgg ctgaggcctg gagccgcagg acgccgttca gtcacgaagt cattgtcatg 241 gacatggacc cttttcttca ctgtgtgatc ccaaacttca tccaaagcca agacttctta 301 gaagggcttc agaaggaact gatgaacttg gacttccatg agaagtataa tgatttatat 361 aagttccagc agtctgatga tttgaagaag agaagagagc ctcacatctc cactttaagg 421 aaaattctgt ttgaagattt ccggtcctgg ctttctgata tttctaaaat tgacctggaa 481 tcaaccattg acatgtcctg tgctaaatat gaattcactg atgccctgct gtgccatgat 541 gatgagctgg aagggcgccg gattgccttc atcctgtacc tggttcctcc ctgggacagg 601 agcatgggtg gtaccctgga cctgtacagc attgatgaac actttcagcc gaagcagatt 661 gtcaagtctc ttatcccttc gtggaacaaa ctggttttct ttgaagtatc tcctgtgtcc 721 tttcaccagg tgtctgaagt gctgtctgaa gaaaagtcac gtttgtctat aagtggctgg 781 tttcatggtc catcattgac tcggcctccc aactactttg aaccccccat acctcggagc 841 cctcacatcc cacaagatca tgagattttg tatgattgga tcaaccctac ttatctggac 901 atggattacc aagttcaaat tcaagaagag tttgaagaaa gttctgaaat tctcctgaag 961 gagtttctta agcctgagaa attcacgaaa gtctgtgagg ccttggagca tggacatgtg 1021 gaatggagca gccgaggtcc ccctaacaaa aggttttatg agaaagctga ggagagtaag 1081 cttcctgaga tattgaagga gtgcatgaag ttatttcgct ctgaggcact attcttgctg 1141 ctctccaact tcacaggcct gaagcttcat ttcttggccc cttcggaaga agatgagatg 1201 aatgataaaa aagaggcaga aaccactgat atcactgaag aagggactag ccatagtcct 1261 cctgagccag agaataatca gatggccatc agcaacaaca gccaacagag caatgagcag 1321 acagacccag agccagagga aaatgaaaca aagaaagaat caagtgttcc catgtgccaa 1381 ggggaactga ggcattggaa gaccggtcac tacactttaa ttcatgacca tagcaaggct 1441 gaatttgccc tagacttaat tctgtactgt ggctgtgaag gctgggagcc agaatatggc 1501 ggttttactt cttacattgc caaaggtgaa gatgaagagc tgctaacagt gaatccagaa 1561 agcaattctt tggcattggt ctacagagac agagagactc tgaaatttgt caagcatatt 1621 aaccaccgaa gcctggaaca aaagaaaacc ttcccaaaca gaacaggttt ctgggacttt 1681 tcattcatct attatgaatg acagcactgg gcaaagctga acaaaaatgt gacccttcgt 1741 aattactggg aagtctgaaa gagctaagca tggagtcaag gagaactaca tggtagcttg 1801 cctgacagtg ttcttaaaac tggttgtctt ttactaggac tcataatgat tgtcctcaac 1861 cgagaccttg agcttgcagc taagtactta tctcttgatt aaaaaaaaaa agttggcttt 1921 ttttttttta acatttagtc ctttttccat attggcttct tcagtgaatt tttaagttca 1981 atttgttttt attgaggtaa aatatttata acataaaact gaccagctta cccattttta 2041 aatatgcaat tcagtggatt aagtacattc tcattgttgt ccagccatca ccatcatcca 2101 tctccagaag ttttccatct tcccaaattc tgtgcccatt gaacaataac tccccacctc 2161 cccttcccct agcaacagcc ataccttttg tctctatcat caacttcact actcatattt 2221 ctcatgtaag tggaatcata cagtatttgt ccttttgtga ctggtttcac ttagcataaa 2281 gtctttaaga tgcaaaaaaa aaaaaaaaaa a //