LOCUS BC032865 2767 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens TNNI3 interacting kinase, mRNA (cDNA clone MGC:33828
IMAGE:5263275), complete cds.
ACCESSION BC032865
VERSION BC032865.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2767)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2767)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503776.
FEATURES Location/Qualifiers
source 1..2767
/db_xref="H-InvDB:HIT000333954"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33828 IMAGE:5263275"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2767
/gene="TNNI3K"
/gene_synonym="CARK"
/db_xref="GeneID:51086"
CDS 41..2572
/gene="TNNI3K"
/gene_synonym="CARK"
/codon_start=1
/product="TNNI3K protein"
/protein_id="AAH32865.1"
/db_xref="GeneID:51086"
/translation="MAAARDPPEVSLREATQRKLRRFSELRGKLVARGEFWDIVAITA
ADEKQELAYNQQLSEKLKRKELPLGVQYHVFVDPAGAKIGNGGSTLCALQCLEKLYGD
KWNSFTILLIHSDEWKKKVSESYVITIERLEDDLQIKEKELTELRNIFGSDEAFSKVN
LNYRTENGLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGFTALHLAVYKDNAELI
TSLLHSGADVQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNIQDAVFFTPLHIAA
YYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEEGSKADVNAQDN
EDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGKFEVAKEIIQ
ISGTESLTKENIFSETAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHTGLHSACY
HGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRP
QDELPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSEIEF
HEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQ
FVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLT
QPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLLWMAPEVFTQC
TRYTIKADVFSYALCLWEILTGEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKPISSL
LIRGWNACPEAKSRPSHYPVSSVYTETLKKKNEDRFGMWIEYLRR"
BASE COUNT 821 a 570 c 611 g 765 t
ORIGIN
1 agcgggtgct gtgcggcgcg gtctcaggga aggtggggct atggcagctg ctagggaccc
61 tccggaagta tcgctgcgag aagccaccca gcgaaaattg cggaggtttt ccgagctaag
121 aggcaaactt gtagcacgtg gagaattctg ggacatagtt gcaataacag cggctgatga
181 aaaacaggaa cttgcttaca accaacagct gtcagaaaag ctgaaaagaa aggagttacc
241 ccttggagtt caatatcacg tttttgtaga tcctgctgga gccaaaattg gaaatggagg
301 atcaacactt tgtgcccttc aatgtttgga aaagctatat ggagataaat ggaattcttt
361 taccatctta ttaattcact ctgatgaatg gaagaaaaaa gtcagtgaat catatgttat
421 cacaatagaa agattagaag atgacctgca gatcaaggaa aaagaactga cagaactaag
481 gaatatattt ggctctgatg aagccttcag taaagtcaat ttaaattacc gcactgaaaa
541 tgggctgtct ctacttcatt tatgttgcat ttgtggaggc aagaaatcac atattcgaac
601 tcttatgttg aaagggctcc gcccatctcg actgacaaga aatggattta cagccttgca
661 tttagcagtt tacaaggata atgcagaatt gatcacttct ctgcttcaca gtggagctga
721 tgtacagcag gttggatacg gtggcctcac tgccctccat attgctacaa tagctggcca
781 cctagaggct gctgatgtgc tgttgcaaca tggagctaat gtcaatattc aagatgcagt
841 ttttttcact ccattgcata ttgcagcgta ctatggacat gaacaggtaa ctcgccttct
901 tttgaaattt ggtgctgatg taaatgtaag tggtgaagtt ggagatagac ccctccacct
961 agcatctgca aaaggattct tgaatattgc aaaactcttg atggaagaag gcagcaaagc
1021 agatgtgaat gctcaagata atgaagacca tgtcccactc catttctgtt ctcgatttgg
1081 acaccatgat atagttaagt atctgctgca aagtgatttg gaagttcaac ctcatgttgt
1141 taatatctat ggagataccc ccttacacct ggcatgctac aatggcaaat ttgaagttgc
1201 caaggaaatc atccaaatat caggaacaga aagtctgact aaggaaaaca tcttcagtga
1261 aacagctttt catagtgctt gtacctatgg caagagcatt gacctagtca aatttcttct
1321 tgatcagaat gtcataaaca tcaaccacca aggaagggat gggcacactg gattacactc
1381 tgcttgctac cacggtcaca ttcgcctggt tcagttctta ctggataatg gagctgatat
1441 gaatctagtg gcttgtgatc ccagcaggtc tagtggtgaa aaagatgagc agacatgttt
1501 gatgtgggct tatgaaaaag ggcatgatgc cattgtcaca ctcctgaagc attataagag
1561 accacaagat gaattgccct gtaatgaata ttctcagcct ggaggagatg gctcctatgt
1621 gtctgttcca tcacccttgg ggaagattaa aagcatgaca aaagagaagg cagatattct
1681 cctcctaaga gctggattgc cttcacattt ccatcttcag ctctcagaaa ttgagttcca
1741 tgagattatt ggctcaggtt cttttgggaa agtatataaa ggacgatgca gaaataaaat
1801 agtggctata aaacgttatc gagccaatac ctactgctcc aagtcagatg tggatatgtt
1861 ttgccgagag gtgtccattc tctgccagct caatcatccc tgcgtaattc agtttgtggg
1921 tgcttgcttg aatgatccca gccagtttgc cattgtcact caatacatat cagggggttc
1981 tctgttctcc ctccttcatg agcagaagag gattcttgat ttgcagtcta aattaattat
2041 tgcagtagat gttgccaaag gcatggagta ccttcacaac ctgacacagc caattataca
2101 tcgtgacttg aacagtcaca atattcttct ctatgaggat gggcatgctg tggtggcaga
2161 ttttggagaa tcaagatttc tacagtctct ggatgaagac aacatgacaa aacaacctgg
2221 gaacctcctt tggatggctc ctgaggtgtt cacgcagtgc actcggtaca ccatcaaagc
2281 agatgtcttc agctatgctc tgtgtctgtg ggaaattctc actggcgaaa ttccattcgc
2341 tcatctcaag ccagcggctg cggcagcaga catggcttac caccacatca gacctcccat
2401 tggctattcc attcccaagc ccatatcatc tctgctgata cgagggtgga acgcatgtcc
2461 tgaagcaaaa tccagaccaa gtcattaccc agtctcatct gtgtacacag aaactcttaa
2521 gaagaaaaat gaagatcgtt ttgggatgtg gattgagtat ctcagaagat aacctcttat
2581 cctggccatt caacctgatg tgttacatgt ttatttgttt agaatcttcc atcactacca
2641 aaatgttagc tccatgaaag cggtcctttt tgtttatttt gttcactgct ataacactaa
2701 catctaaagc tggatgctta agaatgtttg ttgagtaaat gaatgaatac caaaaaaaaa
2761 aaaaaaa
//