LOCUS BC032855 3741 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cytokine-like nuclear factor n-pac, mRNA (cDNA clone
MGC:33217 IMAGE:5265561), complete cds.
ACCESSION BC032855
VERSION BC032855.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3741)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3741)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40556375.
FEATURES Location/Qualifiers
source 1..3741
/db_xref="H-InvDB:HIT000092838"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33217 IMAGE:5265561"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3741
/gene="N-PAC"
/gene_synonym="BM045"
/gene_synonym="HIBDL"
/db_xref="GeneID:84656"
CDS 29..1690
/gene="N-PAC"
/gene_synonym="BM045"
/gene_synonym="HIBDL"
/codon_start=1
/product="cytokine-like nuclear factor n-pac"
/protein_id="AAH32855.1"
/db_xref="GeneID:84656"
/translation="MAAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKECFFV
KFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSH
NSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPL
KRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFH
HFLLSQTEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLG
LMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDP
KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQ
LSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMAT
IAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLR
LAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH"
BASE COUNT 940 a 959 c 993 g 849 t
ORIGIN
1 agcgggtcgg cggtggttgg gtggtaagat ggcggctgtg agtctgcggc tcggcgactt
61 ggtgtggggg aaactcggcc gatatcctcc ttggccagga aagattgtta atccaccaaa
121 ggacttgaag aaacctcgcg gaaaggaatg cttctttgtg aaattttttg gaacagaaga
181 tcatgcctgg atcaaagtgg aacagctgaa gccatatcat gctcataaag aggaaatgat
241 aaaaattaac aagggtaaac gattccagca agcggtagat gctgtcgaag agttcctcag
301 gagagccaaa gggaaagacc agacgtcatc ccacaattct tctgatgaca agaatcgacg
361 taattccagt gaggagagaa gtaggccaaa ctcaggtgat gagaagcgca aacttagcct
421 gtctgaaggg aaggtgaaga agaacatggg agaaggaaag aagagggtgt cttcaggctc
481 ttcagagaga ggctccaaat cccctctgaa aagagcccaa gagcaaagtc cccggaagcg
541 gggtcggccc ccaaaggatg agaaggatct caccatcccg gagtctagta ccgtgaaggg
601 gatgatggcc ggaccgatgg ccgcgtttaa atggcagcca accgcaagcg agcctgttaa
661 agatgcagat cctcatttcc atcatttcct gctaagccaa acagagaagc cagctgtctg
721 ttaccaggca atcacgaaga agttgaaaat atgtgaagag gaaactggct ccacctccat
781 ccaggcagct gacagcacag ccgtgaatgg cagcatcaca cccacagaca aaaagatagg
841 atttttgggc cttggtctca tgggaagtgg aatcgtctcc aacttgctaa aaatgggtca
901 cacagtgact gtctggaacc gcactgcaga gaaatgtgat ttgttcatcc aggagggggc
961 ccgtctggga agaacccccg ctgaagtcgt ctcaacctgc gacatcactt tcgcctgcgt
1021 gtcggatccc aaggcggcca aggacctggt gctgggcccc agtggtgtgc tgcaagggat
1081 ccgccctggg aagtgctacg tggacatgtc aacagtggac gctgacaccg tcactgagct
1141 ggcccaggtg attgtgtcca ggggggggcg ctttctggaa gcccccgtct cagggaatca
1201 gcagctgtct aatgacggga tgttggtgat cttagcggct ggagacaggg gcttatatga
1261 ggactgcagc agctgcttcc aggcgatggg gaagacctcc ttcttcctag gtgaagtggg
1321 caatgcagcc aagatgatgc tgatcgtgaa catggtccaa gggagcttca tggccactat
1381 tgccgagggg ctgaccctgg cccaggtgac aggccagtcc cagcagacac tcttggacat
1441 cctcaatcag ggacagttgg ccagcatctt cctggaccag aagtgccaaa atatcctgca
1501 aggaaacttt aagcctgatt tctacctgaa atacattcag aaggatctcc gcttagccat
1561 tgcgctgggt gatgcggtca accatccgac tcccatggca gctgcagcaa atgaggtgta
1621 caaaagagcc aaggcgctgg accagtctga caacgatatg tccgccgtgt accgagccta
1681 catacactaa gctgtcgaca ccccgccctc acccctccaa tcccccctct gaccccctct
1741 tcctcacatg gggtcggggg cctgggagtt cattctggac cagcccacct atctccattt
1801 ccttttatac agactttgag acttgccatc agcacagcac acagcagcac ccttcccctg
1861 aggccggtgg ggaggggaca agtgtcagca ggattggcgt gtgggaaagc tcttgagctg
1921 ggcactggcc ccccggacga ggtggctgtg tgttcacaca cacacacaca cacacacaca
1981 cacacacaca cacaggctct cgccccagga tagaagctgc ccagaaactg ctgcctggct
2041 ttttttcttc cgagcttgtc ttatctcaaa ccccttccag tcaaggaact agaatcagca
2101 acgagagttg gaagccttcc cacagcttcc cccagagcga agaggctgta gtcatgtccc
2161 catcccccac tggattccct acaaggagag gccttgggcc cagatgagcc agtacagact
2221 ccagacagag gggcccttgg ggccctccaa cctcaggtga tgagctgaga aagatgttca
2281 cgtctaagcg tccagtgtgc accaagcgct ccatagacgc ctttgtgaac tgaaaagaga
2341 ctggcagagt cccgagaaga tggggccctg gctttccagg gagtgcagca agcagccggc
2401 ctgcaggtga gcatggaggc caggccctca ccgcctcgaa gccatgcccc agatgccact
2461 gccacagcgg gcgctcgctc ctccctaggc tgttttagta tttggatttg cattccatcc
2521 cttgggaggg agtcctcagg gccactagtg atgagccaag aggagtgggg gttgggggcg
2581 ctcctttctg tttccgttag gccacagact cttcacctgg ctctgaagag ccactcttac
2641 ctcggtcccc tcccagtggt cccaccttct ccaccctgcc ctgccaagtc ccctgcatgc
2701 ccaccgctct ccatcctccc tcctctccct cttcctcccg tggagacagt atttctttct
2761 gtctgtccct ttggcccaga cccagcctga ccaacgatga gcatttctta ggctcagctc
2821 ttgatacgga aacgagtgtc ttcactccag ccagcatcat ggtcttcggt gcttcccggg
2881 cccggggtct gtcgggaggg aagagaactg ggcctgacct acctgaactg actggccctc
2941 cgaggtgggt ctgggacatc ctagaggccc tacatttgtc cttggatagg ggaccggggg
3001 gggcttggaa tgttgcaaaa aaaaaagtta cccaagggat gtcagttttt tatccctctg
3061 catgggttgg attttccaaa atcataattt gcagaaggaa ggccagcatt tacgatgcaa
3121 tatgtaatta tatatagggt ggccacacta gggcggggtc cttcccacct cacagctttg
3181 gcccctttca gagattagaa actgggttag aggattgcag aagacgagtg gggggagggc
3241 agggaagatg cctgtcgggt ttttagcaca gttcatttca ctgggatttt gaagcatttc
3301 tgtctgaaca caaagcctgt tctagtcctg gcggaacaca ctgggggtgg gggcggggga
3361 agatgcggta atgaaaccgg ttagtcaatt ttgtcttaat attgttgaca attctgtaaa
3421 gttccttttt atgaatattt ctgtttaagc tatttcacct ttcttttgaa atccttccct
3481 tttaaggaga aaatgtgaca cttgtgaaaa agcttgtaag aaagcccctc cctttttttc
3541 tttaaacctt taaatgacaa atctaggtaa ttaaggttgt gaatttttat ttttgctttg
3601 tttttaatga acatttgtct ttcagaatag gattgtgtga taatgtttaa atggcaaaaa
3661 caaaacatga ttttgtgcaa ttaacaaagc tactgcaaga aaaataaaac acttcttggt
3721 aacacaaaaa aaaaaaaaaa a
//