LOCUS BC032775 1533 bp mRNA linear HUM 25-JUL-2005 DEFINITION Homo sapiens chromosome 1 open reading frame 142, mRNA (cDNA clone IMAGE:4453456), complete cds. ACCESSION BC032775 VERSION BC032775.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1533) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1533) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: e Column: 23 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1533 /db_xref="H-InvDB:HIT000041713" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4453456" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_89" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1533 /gene="C1orf142" /gene_synonym="IMAGE3451454" /gene_synonym="SVAP1" /db_xref="GeneID:116841" CDS 235..903 /gene="C1orf142" /gene_synonym="IMAGE3451454" /gene_synonym="SVAP1" /codon_start=1 /product="C1orf142 protein" /protein_id="AAH32775.1" /db_xref="GeneID:116841" /translation="MTSCEPFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHD SSSLLMHRFEREDVDDIKVHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFS KKMELLEDALVLRSARTSSPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTS LPALSEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRM KRLT" BASE COUNT 414 a 394 c 410 g 315 t ORIGIN 1 ccacgcgtcc gtgagggcaa ggctccggtt cctgccctca cagggtccca gaagcaaggg 61 cagtgaggac ctggcccacg tccctggcac gggctgtctg attctccttc gctgtggcgg 121 gaagatggcc ggatttgaag attgctgaca gaactggaat ctcctgcttg gtggcccttt 181 agctccaagc tttggaagac accaccggaa acaaagccca gggaagatgt ctccatgacc 241 agttgtgaac cctttgggaa agaagggata ctgataaaaa ttcctgctgt tatttcccac 301 agaacagagt ctcacgttaa accagggagg ctcaccgtcc ttgtgtctgg gttggaaata 361 catgactcca gttctttgct catgcacagg tttgaaagag aagacgtgga cgacatcaag 421 gtccactcac cttacgaaat tagcatccgc cagcggttta ttggaaagcc agacatggcc 481 tatcgtttga tatctgccaa gatgccagag gttatcccca ttttagaagt gcagttcagc 541 aagaagatgg agctgttaga agatgcattg gtgctcagaa gcgcaagaac ctcttccccc 601 gcagagaaga gctgctcagt ctggcatgca gcatctgggc tgatgggccg taccctgcac 661 cgtgagccac ccgcaggaga ccaggagggc acagcactgc acctgcagac aagtctgcca 721 gccctttctg aggcagatac ccaggaacta acccagatcc tgaggaggat gaaggggctg 781 gccctggagg ccgagagtga gctggagaga caagacgaag ccctggatgg cgttgcagca 841 gctgtggaca gggcaacctt gaccatcgac aagcacaaca ggcggatgaa gaggctgacc 901 taggggcaga acgtccctgc attcctgtct caccctgcac atcccgctga gatggagggc 961 tgggcggcag tgccagggct gcagaggcct gtggccctcc ggagtggtct tcctctggat 1021 ggggctgcta ctgtggggct gcttctgcac caggggcctc cccaggtgtg caccatgcct 1081 gcctcccact tggctgtccc tgctgctggg caggacccgg ccacatgttc tgcggatgct 1141 gcagaagtgt ggaccatggc gggaccccaa ggacacttgg cacaggcctg gaagaggccg 1201 ccctcgtctt gtctcggctc cctttcatgg acagactggc cttcttagct gtactataaa 1261 tttgtgagtg aagttagagc ccagctcact tagccagctc actttgaggg catcctataa 1321 acacccaact gttcttttat cgtctcggtt ttagccaaaa gtgaaattag catgactgca 1381 tctttcaaac aaaaatattg atttctgctt ttagggcccc gtttccatcc agaaataaag 1441 ggaaatgctg gcttcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //