LOCUS BC032722 1748 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tumor necrosis factor (ligand) superfamily, member 10, mRNA (cDNA clone MGC:45300 IMAGE:5504670), complete cds. ACCESSION BC032722 VERSION BC032722.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1748) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1748) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: h Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23510439. FEATURES Location/Qualifiers source 1..1748 /db_xref="H-InvDB:HIT000041693" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45300 IMAGE:5504670" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1748 /gene="TNFSF10" /gene_synonym="Apo-2L" /gene_synonym="APO2L" /gene_synonym="CD253" /gene_synonym="TL2" /gene_synonym="TRAIL" /db_xref="GeneID:8743" /db_xref="HGNC:HGNC:11925" /db_xref="MIM:603598" CDS 76..921 /gene="TNFSF10" /gene_synonym="Apo-2L" /gene_synonym="APO2L" /gene_synonym="CD253" /gene_synonym="TL2" /gene_synonym="TRAIL" /codon_start=1 /product="tumor necrosis factor (ligand) superfamily, member 10" /protein_id="AAH32722.1" /db_xref="GeneID:8743" /db_xref="HGNC:HGNC:11925" /db_xref="MIM:603598" /translation="MAMMEVQGGPSLGQTCVLIVIFTVLLQSLCVAVTYVYFTNELKQ MQDKYSKSGIACFLKEDDSYWDPNDEESMNSPCWQVKWQLRQLVRKMILRTSEETIST VQEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRKINSWESSRSG HSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPD PILLMKSARNSCWSKDAEYGLYSIYQGGIFELKENDRIFVSVTNEHLIDMDHEASFFG AFLVG" BASE COUNT 597 a 361 c 374 g 416 t ORIGIN 1 ccacgcgtcc gagaaggaag ggcttcagtg accggctgcc tggctgactt acagcagtca 61 gactctgaca ggatcatggc tatgatggag gtccaggggg gacccagcct gggacagacc 121 tgcgtgctga tcgtgatctt cacagtgctc ctgcagtctc tctgtgtggc tgtaacttac 181 gtgtacttta ccaacgagct gaagcagatg caggacaagt actccaaaag tggcattgct 241 tgtttcttaa aagaagatga cagttattgg gaccccaatg acgaagagag tatgaacagc 301 ccctgctggc aagtcaagtg gcaactccgt cagctcgtta gaaagatgat tttgagaacc 361 tctgaggaaa ccatttctac agttcaagaa aagcaacaaa atatttctcc cctagtgaga 421 gaaagaggtc ctcagagagt agcagctcac ataactggga ccagaggaag aagcaacaca 481 ttgtcttctc caaactccaa gaatgaaaag gctctgggcc gcaaaataaa ctcctgggaa 541 tcatcaagga gtgggcattc attcctgagc aacttgcact tgaggaatgg tgaactggtc 601 atccatgaaa aagggtttta ctacatctat tcccaaacat actttcgatt tcaggaggaa 661 ataaaagaaa acacaaagaa cgacaaacaa atggtccaat atatttacaa atacacaagt 721 tatcctgacc ctatattgtt gatgaaaagt gctagaaata gttgttggtc taaagatgca 781 gaatatggac tctattccat ctatcaaggg ggaatatttg agcttaagga aaatgacaga 841 atttttgttt ctgtaacaaa tgagcacttg atagacatgg accatgaagc cagttttttc 901 ggggcctttt tagttggcta actgacctgg aaagaaaaag caataacctc aaagtgacta 961 ttcagttttc aggatgatac actatgaaga tgtttcaaaa aatctgacca aaacaaacaa 1021 acagaaaaca gaaaacaaaa aaacctctat gcaatctgag tagagcagcc acaaccaaaa 1081 aattctacaa cacacactgt tctgaaagtg actcacttat cccaagaaaa tgaaattgct 1141 gaaagatctt tcaggactct acctcatatc agtttgctag cagaaatcta gaagactgtc 1201 agcttccaaa cattaatgca atggttaaca tcttctgtct ttataatcta ctccttgtaa 1261 agactgtaga agaaagcgca acaatccatc tctcaagtag tgtatcacag tagtagcctc 1321 caggtttcct taagggacaa catccttaag tcaaaagaga gaagaggcac cactaaaaga 1381 tcgcagtttg cctggtgcag tggctcacac ctgtaatccc aacattttgg gaacccaagg 1441 tgggtagatc acgagatcaa gagatcaaga ccatagtgac caacatagtg aaaccccatc 1501 tctactgaaa gtgcaaaaat tagctgggtg tgttggcaca tgcctgtagt cccagctact 1561 tgagaggctg aggcaggaga atcgtttgaa cccgggaggc agaggttgca gtgtggtgag 1621 atcatgccac tacactccag cctggcgaca gagcgagact tggtttcaaa aaaaaaaaaa 1681 aaaaaaactt cagtaagtac gtgttatttt tttcaataaa attctattac agtaaaaaaa 1741 aaaaaaaa //