LOCUS BC032714 1976 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens tubby like protein 1, mRNA (cDNA clone MGC:45167
IMAGE:5495136), complete cds.
ACCESSION BC032714
VERSION BC032714.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1976)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1976)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6715609.
FEATURES Location/Qualifiers
source 1..1976
/db_xref="H-InvDB:HIT000041687"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45167 IMAGE:5495136"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1976
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/db_xref="GeneID:7287"
/db_xref="MIM:602280"
CDS 30..1499
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/codon_start=1
/product="TULP1 protein"
/protein_id="AAH32714.1"
/db_xref="GeneID:7287"
/db_xref="MIM:602280"
/translation="MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKK
RTEAPESPCPTGSKPRKPGEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADL
KERRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDPSGSP
ASARKSPAAMFLVGEGSPDKKALKKKGTPKGARKEEEEEEEAATVIKNSNQKGKAKGK
GKKKAKEERAPSPPVEVDEPREFVLRPAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLD
TEKKVFLLAGRKRKRSKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQN
PQRGYSTNVASLRQELAAVIYETNVLGFRGPRRMTVIIPGMSAENERVPIRPRNASDG
LLVRWQNKTLESLIELHNKPPVWNDDSGSYTLNFQGRVTQASVKNFQIVHADDPDYIV
LQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE"
misc_feature 762..1496
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/note="Tub; Region: Tub family"
/db_xref="CDD:pfam01167"
BASE COUNT 493 a 587 c 627 g 269 t
ORIGIN
1 ccacgcgtcc ggcgataggc aaaggcacca tgcctctgcg ggatgaaacc ctccgagagg
61 tgtgggcctc tgacagtggg catgaagaag aaagcctgag cccggaggcc ccgcggcgcc
121 ccaaacagcg acccgccccg gcacagaggc taaggaagaa gaggacggag gcccccgaat
181 ccccctgccc cacgggatcc aagccccgga agcccggaga ggaggaggag gaagaggagg
241 acgaggagga cgaggaagag gaggcagagg aaaagaaaga gaaaatcctt ctgcctccca
301 agaagcccct gagagagaag agctccgcag acctgaagga gaggagggcc aaggcccagg
361 gcccaagggg agacctggga agccctgacc ccccaccgaa acctctgcgt gttaggaata
421 aggaagctcc agcaggggag gggaccaaga tgagaaagac caagaagaaa gggtctgggg
481 aggccgacaa ggacccctca gggagcccag ccagtgcgag gaagagccca gcagccatgt
541 ttctggttgg ggaaggcagt cctgacaaga aagccctgaa gaagaaaggc actcccaaag
601 gcgcgaggaa ggaggaagaa gaggaggagg aggcagctac ggtgataaag aacagcaatc
661 aaaagggcaa agccaaagga aaaggcaaaa agaaagcgaa ggaggagagg gccccgtctc
721 cccccgtgga ggtggacgaa ccccgggagt ttgtgctccg gcctgccccc cagggccgca
781 cggtgcgctg ccggctgacc cgggacaaaa agggcatgga tcgaggcatg tatccctcct
841 acttcctgca cctggacacg gagaagaagg tgttcctctt ggctggcagg aaacgaaaac
901 ggagcaagac agccaattac ctcatctcca tcgaccctac caatctgtcc cgaggagggg
961 agaatttcat cgggaagctg aggtccaacc tcctggggaa ccgcttcacg gtctttgaca
1021 acgggcagaa cccacagcgt gggtacagca ctaatgtggc aagccttcgg caggagctgg
1081 cagctgtgat ctatgaaacc aacgtgctgg gcttccgtgg cccccggcgc atgaccgtca
1141 tcattcctgg catgagtgcg gagaacgaga gggtccccat ccggccccga aatgctagtg
1201 acggcctgct ggtgcgctgg cagaacaaga cgctggagag cctcatagaa ctgcacaaca
1261 agccacctgt ctggaacgat gacagtggct cctacaccct caacttccaa ggccgggtca
1321 cccaggcctc agtcaagaac ttccagattg tccacgctga tgaccccgac tatatcgtgc
1381 tgcagttcgg ccgcgtggcg gaggacgcct tcaccctaga ctaccggtac ccgctgtgcg
1441 ccctgcaggc cttcgccatc gccctctcca gtttcgacgg gaagctggcc tgcgagtgac
1501 cccagcagcc cctcagcgcc cccagagccc gtcagcgtgg gggaaaggat tcagtggagg
1561 ctggcagggt ccctccagca aagctcccgc ggaaaactgc tcctgtgtcg gggctgacct
1621 ctcactgcct ctcggtgacc tccgtcctct ccccagcctg gcacaggccg aggcaggagg
1681 agcccggacg gcgggtagga cggagatgaa gaacatctgg agttggagcc gcacatctgg
1741 tctcggagct cgcctgcgcc gctgtgcccc cctcctcccc gcgccccagt cacttcctgt
1801 ccgggagcag tagtcattgt tgttttaacc tcccctctcc ccgggaccgc gctagggctc
1861 cgaggagctg gggcgggcta ggaggagggg gtaggtgatg ggggacgagg gccaggcacc
1921 cacatcccca ataaagccgc gtccttggca aaaaaaaaaa aaaaaaaaaa aaaaaa
//