LOCUS BC032705 2681 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:5498410), partial cds.
ACCESSION BC032705
VERSION BC032705.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2681)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..2681
/db_xref="H-InvDB:HIT000092771"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5498410"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2681
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 338..>2681
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAH32705.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEIEELEKRKDKETGGILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKEL
EKNMVEDSKTLAAKEKEVKKITDGLHALQEASNKDAEALAAAQQHFNAVSAGLSSNED
GAEATLAGQMMACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSGYRKDQEA
LEAVKRLKEKLEAEMKKLNYEENKEESLLEKRRQLSRDIGRLKETYEALLARFPNLRF
AYKDPEKNWNRNCVKGLVASLISVKDTSATTALELVAGERLYNVVVDTEVTGKKLLER
GELKRRYTIIPLNKISARCIAPETLRVAQNLVGPDNVHVALSLVEYKPELQKAMEFVF
GTTFVCDNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQELK
DVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHK
QQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLEKKKK"
BASE COUNT 981 a 452 c 612 g 636 t
ORIGIN
1 ccacgcgtcc ggggaggggg accagtggca gagggacctt aggtgatcct tagaaataaa
61 ggctagcttc tgttcgacct tggagtaggg cgaagaggtg tagacaggcc tggagaagcg
121 aggtaaaagc ctgagtaaaa gcaagaagtt ggagaatatg agatacatct catctctagt
181 aaatacttaa atgacttccc ctcctcccgg agtcaagcac aattcgggga tgcaatgacg
241 gacgtaggtg aagacactgc gggaacttac agacaaaact ggtttgtggc ctgtttgatt
301 cctgtcagag gtttgctgac ccaagacagt atcgaaaatg catattaagt caattattct
361 agagggattc aagtcctatg ctcagaggac cgaagtcaat ggttttgacc ccctcttcaa
421 tgctatcact ggcttaaatg gtagtgggaa atccaacata ttggactcca tctgcttttt
481 gctgggcatc tccaacctgt ctcaggttcg ggcttctaat ttacaagatt tagtttacaa
541 aaatgggcag gctggtatta ccaaagcctc tgtgtcaatc acttttgata attctgacaa
601 aaagcaaagt cctttaggat ttgaggttca tgatgaaatc acagtaacaa ggcaggtggt
661 tattggtggt agaaataaat atttaatcaa tggagtcaat gccaacaaca ccagagtaca
721 ggatctcttc tgttctgttg gccttaatgt taacaaccct cactttctca tcatgcaggg
781 ccgaattaca aaagtattga atatgaaacc tccagagatt ttatccatga tagaagaagc
841 agctggaacc aggatgtatg aatacaaaaa aatagctgca cagaaaacta tagaaaaaaa
901 ggaggctaag ctgaaagaaa ttaagacgat acttgaagaa gagattactc caaccattca
961 aaaattaaaa gaggaaagat cgtcctactt ggagtaccaa aaagtaatga gagaaataga
1021 acatttgagt cgtttatata ttgcttatca gtttttgctg gctgaagata ccaaagtacg
1081 ctcagctgag gaattaaaag aaatgcaaga taaagttata aagcttcagg aagaattgtc
1141 tgagaatgat aaaaaaataa aagcacttaa tcatgaaata gaagaattgg aaaaaagaaa
1201 agataaggaa actggaggta tacttcgatc tttagaagat gctcttgcag aggctcagcg
1261 agttaatact aaatctcaaa gcgcatttga tctcaagaag aaaaatctgg catgtgagga
1321 aagcaaacgc aaagagctgg aaaaaaatat ggttgaggac tcaaaaactt tagcagcaaa
1381 ggaaaaagag gttaaaaaga taacagatgg actgcatgcc cttcaagaag caagtaataa
1441 agatgctgaa gctctggcag ctgcacagca gcacttcaat gctgtttccg ctggcctgtc
1501 cagtaatgaa gatggagcag aagcaactct tgctggtcaa atgatggcct gtaaaaatga
1561 tataagtaaa gctcagacag aagccaaaca ggctcagatg aagttgaagc atgctcaaca
1621 ggaattaaag aataaacaag ctgaagttaa gaagatggat agtggctaca ggaaggatca
1681 agaagctcta gaagctgtaa aaagacttaa agaaaaactt gaagctgaaa tgaaaaagct
1741 aaattatgaa gaaaataaag aggaaagcct tttggaaaag cgcaggcagc tgtctcgtga
1801 tattggtaga ttgaaagaaa catatgaagc tctattagcc agatttccca atcttcgatt
1861 tgcatacaag gatccagaga agaactggaa tagaaattgt gtgaaaggac ttgtggcttc
1921 tctgattagt gtgaaagaca cttctgcaac cacagcttta gaattagtgg ctggagaacg
1981 actctacaat gttgtagtag acacagaagt tactggtaaa aagctactag aaagggggga
2041 actgaaacgt cgatacacta taattccact caataaaatt tcagccagat gtattgcacc
2101 agaaactctg agagttgctc agaatcttgt tggccctgac aacgttcatg tggctctttc
2161 cttggttgaa tataaaccag aacttcagaa agcaatggag tttgtctttg gaacaacatt
2221 tgtttgtgac aatatggata atgccaaaaa agtggccttt gataagagga taatgactag
2281 aactgtaact ctcggaggtg atgtgtttga tcctcatggg acattgagtg gaggtgctcg
2341 atcccaggca gcttccattt taaccaagtt tcaagaactc aaagatgttc aggatgaact
2401 gagaatcaaa gagaatgagc tgcgggctct agaagaggaa ttagcaggtc ttaaaaacac
2461 tgctgaaaag tatcgccaac taaaacagca gtgggagatg aaaactgaag aggcagattt
2521 attacaaacc aagctccagc aaagctcata tcacaagcaa caagaagaat tagatgccct
2581 taaaaaaacc attgaggaaa gtgaggagac tttgaaaaac actaaagaaa tccaaagaaa
2641 agcagaagaa aaatatgaag tattggaaaa aaaaaaaaaa a
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