LOCUS BC032703 1905 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens peripherin, mRNA (cDNA clone MGC:45209 IMAGE:5247559), complete cds. ACCESSION BC032703 VERSION BC032703.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1905) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1905) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: d Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 66932907. FEATURES Location/Qualifiers source 1..1905 /db_xref="H-InvDB:HIT000041679" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45209 IMAGE:5247559" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1905 /gene="PRPH" /db_xref="GeneID:5630" /db_xref="HGNC:HGNC:9461" /db_xref="MIM:170710" CDS 36..1448 /gene="PRPH" /codon_start=1 /product="peripherin" /protein_id="AAH32703.1" /db_xref="GeneID:5630" /db_xref="HGNC:HGNC:9461" /db_xref="MIM:170710" /translation="MSHHPSGLRAGFSSTSYRRTFGPPPSLSPGAFSYSSSSRFSSSR LLGSASPSSSVRLGSFRSPRAGAGALLRLPSERLDFSMAEALNQEFLATRSNEKQELQ ELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGR ERDRVQVERDGLAEDLAALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKI ESLMDEIEFLKKLHEEELRDLQVSVESQQVQQVEVEATVKPELTAALRDIRAQYESIA AKNLQEAEEWYKSKYADLSDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNE ALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLNVKMALDIE IATYRKLLEGEESRISVPVHSFASLNIKTTVPEVEPPQDSHSRKTVLIKTIETRNGEV VTESQKEQRSELDKSSAHSY" BASE COUNT 491 a 556 c 572 g 286 t ORIGIN 1 gctctgcgaa cggtgactgc ccatccttgg ccgcaatgag ccaccacccg tcgggcctcc 61 gggccggctt cagctccacc tcataccgcc gtaccttcgg tccaccgccc tcactatccc 121 ccggggcctt ctcctactcg tccagctccc gcttctccag cagccgcctg ctgggctccg 181 cgtccccgag ctcctcggtg cgcctgggca gcttccgtag cccccgagcg ggagcgggcg 241 ccctcctgcg cctgccctcg gagcgcctcg acttctccat ggccgaggcc ctcaaccagg 301 agttcctggc cacgcgcagc aacgagaagc aggagctgca ggagctcaac gaccgcttcg 361 ccaacttcat cgagaaggta cgctttctgg agcagcagaa cgcggccctg cgcggggagc 421 tgagccaagc ccggggccag gagccggcgc gcgccgacca gctgtgccag caggagctgc 481 gcgagctgcg gcgagagctg gagctgttgg gccgcgagcg tgaccgggtg caggtggagc 541 gcgacgggct ggcggaggac ctggcggcgc tcaagcagag gttggaggag gagacgcgca 601 agcgggagga cgcggagcac aacctcgtgc tcttccgcaa ggacgtggac gatgccactc 661 tgtcccgcct ggaactagag cgcaagattg agtctctgat ggatgagatt gagttcctca 721 agaagctgca cgaggaggag ctgcgagacc tgcaggtgag tgtggagagc cagcaggtgc 781 agcaggtgga ggtggaagcc acggtgaagc ccgagctgac ggcagcgctg agggacatcc 841 gcgcgcagta cgagagcatc gccgcgaaga acctgcagga ggcggaggag tggtacaagt 901 ccaagtacgc ggacctgtcc gacgctgcca accggaacca cgaggccctg cgccaggcca 961 agcaggagat gaacgagtcc cgacgccaga tccagagtct aacgtgcgag gtggacgggc 1021 tgcgcggcac gaacgaggcg ctgctcaggc agttgagaga gctggaggag cagttcgccc 1081 tggaggcggg gggctaccag gcgggcgctg cgcggctcga ggaggagctg cgacagctaa 1141 aagaggagat ggcgcggcac ctgagggagt accaggagct cctcaacgtc aagatggccc 1201 tggacatcga gatcgccacc taccgcaagc tgctggaggg cgaggagagc cggatctccg 1261 tgcccgtcca ttcttttgcc tccttaaata taaagacgac tgtgcctgag gtggagcctc 1321 cccaggacag ccacagccgg aagacggttc tgatcaagac cattgagacc cggaatgggg 1381 aggtggtgac agagtcccag aaggagcagc gcagtgagct ggacaagtct tctgcccaca 1441 gttactgaac cccttggtcc ggagccttga ctctgcccta ggcctgctca aagcccaaac 1501 cctaagacca ctcctgaatt gtctcctctc cctctgcatg tgtctaaaag gtggtaccag 1561 gcatcccttt cctggcttat ggccaagccc tacccggcca gcagtcgctg ggcctctccc 1621 tgccctgaca cttgatgtga cctatgtgct tcccttttca tgtcccgata agaagccaat 1681 gatcccccct caggacaaat ctactccagc cacgatgaga agtgggtgag ccagggtctg 1741 agtttcacat ttgaaccaaa taaaatgctg tcaagagaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //