LOCUS BC032698 1519 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ephrin-A1, mRNA (cDNA clone MGC:45272 IMAGE:5402648),
complete cds.
ACCESSION BC032698
VERSION BC032698.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1519)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33359679.
FEATURES Location/Qualifiers
source 1..1519
/db_xref="H-InvDB:HIT000041676"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45272 IMAGE:5402648"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1519
/gene="EFNA1"
/gene_synonym="B61"
/gene_synonym="ECKLG"
/gene_synonym="EFL1"
/gene_synonym="LERK1"
/db_xref="GeneID:1942"
/db_xref="HGNC:HGNC:3221"
/db_xref="MIM:191164"
CDS 99..716
/gene="EFNA1"
/gene_synonym="B61"
/gene_synonym="ECKLG"
/gene_synonym="EFL1"
/gene_synonym="LERK1"
/codon_start=1
/product="ephrin-A1"
/protein_id="AAH32698.1"
/db_xref="GeneID:1942"
/db_xref="HGNC:HGNC:3221"
/db_xref="MIM:191164"
/translation="MEFLWAPLLGLCCSLAAADRHTVFWNSSNPKFRNEDYTIHVQLN
DYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPE
KLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRCLRLKVTVSGKITHSPQAHVN
PQEKRLAADDPEVRVLHSIAHSAAPRLFPLAWTVLLLPLLLLQTP"
BASE COUNT 376 a 434 c 399 g 310 t
ORIGIN
1 ccacgcgtcc ggcgctgact gcgccgcgga gaaagccagt gggaacccag acccatagga
61 gacccgcgtc cccgctcggc ctggccaggc cccgcgctat ggagttcctc tgggcccctc
121 tcttgggtct gtgctgcagt ctggccgctg ctgatcgcca caccgtcttc tggaacagtt
181 caaatcccaa gttccggaat gaggactaca ccatacatgt gcagctgaat gactacgtgg
241 acatcatctg tccgcactat gaagatcact ctgtggcaga cgctgccatg gagcagtaca
301 tactgtacct ggtggagcat gaggagtacc agctgtgcca gccccagtcc aaggaccaag
361 tccgctggca gtgcaaccgg cccagtgcca agcatggccc ggagaagctg tctgagaagt
421 tccagcgctt cacacctttc accctgggca aggagttcaa agaaggacac agctactact
481 acatctccaa acccatccac cagcatgaag accgctgctt gaggttgaag gtgactgtca
541 gtggcaaaat cactcacagt cctcaggccc atgtcaatcc acaggagaag agacttgcag
601 cagatgaccc agaggtgcgg gttctacata gcatcgctca cagtgctgcc ccacgcctct
661 tcccacttgc ctggactgtg ctgctccttc cacttctgct gctgcaaacc ccgtgaaggt
721 gtatgccaca cctggcctta aagagggaca ggctgaagag agggacaggc actccaaacc
781 tgtcttgggg ccactttcag agcccccagc cctgggaacc actcccacca caggcataag
841 ctatcaccta gcagcctcaa aacgggtcag tattaaggtt ttcaaccgga aggaggccaa
901 ccagcccgac agtgccatcc ccaccttcac ctcggaggga tggagaaaga agtggagaca
961 gtcctttccc accattcctg cctttaagcc aaagaaacaa gctgtgcagg catggtccct
1021 taaggcacag tgggagctga gctggaaggg gccacgtgga tgggcaaagc ttgtcaaaga
1081 tgccccctcc aggagagagc caggatgccc agatgaactg actgaaggaa aagcaagaaa
1141 cagtttcttg cttggaagcc aggtacagga gaggcagcat gcttgggctg acccagcatc
1201 tcccagcaag acctcatctg tggagctgcc acagagaagt ttgtagccag gtactgcatt
1261 ctctcccatc ctggggcagc actccccaga gctgtgccag caggggggct gtgccaacct
1321 gttcttagag tgtagctgta agggcagtgc ccatgtgtac attctgccta gagtgtagcc
1381 taaagggcag ggcccacgtg tatagtatct gtatataagt tgctgtgtgt ctgtcctgat
1441 ttctacaact ggagtttttt tatacaatgt tctttgtctc aaaataaagc aatgtgtttt
1501 ttcgaaaaaa aaaaaaaaa
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