LOCUS BC032698 1519 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ephrin-A1, mRNA (cDNA clone MGC:45272 IMAGE:5402648), complete cds. ACCESSION BC032698 VERSION BC032698.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1519) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1519) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: d Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33359679. FEATURES Location/Qualifiers source 1..1519 /db_xref="H-InvDB:HIT000041676" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45272 IMAGE:5402648" /tissue_type="Liver, adenocarcinoma" /clone_lib="NIH_MGC_90" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1519 /gene="EFNA1" /gene_synonym="B61" /gene_synonym="ECKLG" /gene_synonym="EFL1" /gene_synonym="LERK1" /db_xref="GeneID:1942" /db_xref="HGNC:HGNC:3221" /db_xref="MIM:191164" CDS 99..716 /gene="EFNA1" /gene_synonym="B61" /gene_synonym="ECKLG" /gene_synonym="EFL1" /gene_synonym="LERK1" /codon_start=1 /product="ephrin-A1" /protein_id="AAH32698.1" /db_xref="GeneID:1942" /db_xref="HGNC:HGNC:3221" /db_xref="MIM:191164" /translation="MEFLWAPLLGLCCSLAAADRHTVFWNSSNPKFRNEDYTIHVQLN DYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPE KLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRCLRLKVTVSGKITHSPQAHVN PQEKRLAADDPEVRVLHSIAHSAAPRLFPLAWTVLLLPLLLLQTP" BASE COUNT 376 a 434 c 399 g 310 t ORIGIN 1 ccacgcgtcc ggcgctgact gcgccgcgga gaaagccagt gggaacccag acccatagga 61 gacccgcgtc cccgctcggc ctggccaggc cccgcgctat ggagttcctc tgggcccctc 121 tcttgggtct gtgctgcagt ctggccgctg ctgatcgcca caccgtcttc tggaacagtt 181 caaatcccaa gttccggaat gaggactaca ccatacatgt gcagctgaat gactacgtgg 241 acatcatctg tccgcactat gaagatcact ctgtggcaga cgctgccatg gagcagtaca 301 tactgtacct ggtggagcat gaggagtacc agctgtgcca gccccagtcc aaggaccaag 361 tccgctggca gtgcaaccgg cccagtgcca agcatggccc ggagaagctg tctgagaagt 421 tccagcgctt cacacctttc accctgggca aggagttcaa agaaggacac agctactact 481 acatctccaa acccatccac cagcatgaag accgctgctt gaggttgaag gtgactgtca 541 gtggcaaaat cactcacagt cctcaggccc atgtcaatcc acaggagaag agacttgcag 601 cagatgaccc agaggtgcgg gttctacata gcatcgctca cagtgctgcc ccacgcctct 661 tcccacttgc ctggactgtg ctgctccttc cacttctgct gctgcaaacc ccgtgaaggt 721 gtatgccaca cctggcctta aagagggaca ggctgaagag agggacaggc actccaaacc 781 tgtcttgggg ccactttcag agcccccagc cctgggaacc actcccacca caggcataag 841 ctatcaccta gcagcctcaa aacgggtcag tattaaggtt ttcaaccgga aggaggccaa 901 ccagcccgac agtgccatcc ccaccttcac ctcggaggga tggagaaaga agtggagaca 961 gtcctttccc accattcctg cctttaagcc aaagaaacaa gctgtgcagg catggtccct 1021 taaggcacag tgggagctga gctggaaggg gccacgtgga tgggcaaagc ttgtcaaaga 1081 tgccccctcc aggagagagc caggatgccc agatgaactg actgaaggaa aagcaagaaa 1141 cagtttcttg cttggaagcc aggtacagga gaggcagcat gcttgggctg acccagcatc 1201 tcccagcaag acctcatctg tggagctgcc acagagaagt ttgtagccag gtactgcatt 1261 ctctcccatc ctggggcagc actccccaga gctgtgccag caggggggct gtgccaacct 1321 gttcttagag tgtagctgta agggcagtgc ccatgtgtac attctgccta gagtgtagcc 1381 taaagggcag ggcccacgtg tatagtatct gtatataagt tgctgtgtgt ctgtcctgat 1441 ttctacaact ggagtttttt tatacaatgt tctttgtctc aaaataaagc aatgtgtttt 1501 ttcgaaaaaa aaaaaaaaa //