LOCUS BC032668 3462 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 561, mRNA (cDNA clone MGC:45408
IMAGE:5540009), complete cds.
ACCESSION BC032668
VERSION BC032668.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3462)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3462)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748660.
FEATURES Location/Qualifiers
source 1..3462
/db_xref="H-InvDB:HIT000041662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45408 IMAGE:5540009"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3462
/gene="ZNF561"
/gene_synonym="MGC45408"
/db_xref="GeneID:93134"
/db_xref="HGNC:HGNC:28684"
CDS 405..1658
/gene="ZNF561"
/gene_synonym="MGC45408"
/codon_start=1
/product="zinc finger protein 561"
/protein_id="AAH32668.1"
/db_xref="GeneID:93134"
/db_xref="HGNC:HGNC:28684"
/translation="MLENYMNLASVEWEIQPRTKRSSLQQGFLKNQIFSGIQMTRGYS
GWKLCDCKNCGEVFREQFCLKTHMRVQNGGNTSEGNCYGKDTLSVHKEASTGQELSKF
NPCGKVFTLTPGLAVHLEVLNARQPYKCKECGKGFKYFASLDNHMGIHTDEKLCEFQE
YGRAVTASSHLKQCVAVHTGKKSKKTKKCGKSFTNFSQLYAPVKTHKGEKSFECKECG
RSFRNSSCLNDHIQIHTGIKPHKCTYCGKAFTRSTQLTEHVRTHTGIKPYECKECGQA
FAQYSGLSIHIRSHSGKKPYQCKECGKAFTTSTSLIQHTRIHTGEKPYECVECGKTFI
TSSRRSKHLKTHSGEKPFVCKICGKAFLYSSRLNVHLRTHTGEKPFVCKECGKAFAVS
SRLSRHERIHTGEKPYECKDMSVTI"
BASE COUNT 1034 a 721 c 729 g 978 t
ORIGIN
1 ccacgcgtcc gctggctcct ctccgtcagt gcggtttcgc ctttatggtg gtggagtctg
61 cccaggctgt ggaccgcaaa taaccctgta caaagaggaa tggagattgc ctctatccac
121 ctagattcat aagctggcct gaggtgatct tggcatcaag gaagggatgc acatcatcac
181 accatcagct tcagagaatg gcagccattt atttgtcccg tgggtttttt tccagggaac
241 caatctgccc ttttgaagaa aagacaaagg tagaaaggat ggtggaggac tacctggcaa
301 gtggttatca ggattcagtg acgtttgatg atgtggctgt ggacttcacc ccagaggagt
361 gggctttact ggacacaact gagaaatacc tctacagaga tgtgatgctg gagaactaca
421 tgaacctggc ctctgtggaa tgggaaatac aacctagaac caaacggtca tcacttcagc
481 agggtttttt gaagaatcaa atattcagtg ggatacaaat gacaagaggc tacagtggat
541 ggaaactctg tgactgtaag aattgtggag aggtcttcag ggaacagttt tgccttaaga
601 cacacatgag agttcagaat ggagggaata cttctgaggg taattgttat ggaaaagaca
661 ccctcagtgt gcacaaggaa gcctctactg gacaggaact ttccaaattt aatccatgtg
721 gaaaagtctt tactctaact ccaggtcttg ctgtacatct tgaagttctc aatgcaagac
781 aaccctacaa atgtaaggaa tgtggaaaag gctttaagta ttttgcaagc cttgataatc
841 atatgggaat ccacactgat gagaaactct gtgaatttca ggaatatggg agagctgtca
901 cagcttcttc acacctaaag cagtgtgtag cagttcatac aggaaagaaa tccaaaaaga
961 ctaagaaatg tgggaaatcc ttcactaatt tttctcaact ttatgcacct gtgaaaactc
1021 ataaaggaga gaagtccttt gaatgtaaag aatgtggaag atcctttaga aattcctcat
1081 gccttaatga tcacattcaa attcacactg gaataaaacc acacaagtgt acttactgtg
1141 ggaaagcctt cactagatca actcaactta ctgaacatgt aagaactcac actggaataa
1201 aaccctatga atgtaaggaa tgtggccaag cctttgctca gtactcgggc ctttctatac
1261 acatacgaag tcacagtgga aagaaaccct atcagtgtaa ggaatgtggg aaagccttca
1321 ctacatccac aagtcttatt cagcatacaa gaattcacac aggagagaag ccttatgaat
1381 gtgttgaatg tgggaagacc ttcattactt cttcccgtcg tagtaaacat ttgaaaactc
1441 atagtggaga aaagcccttt gtatgcaaga tatgtgggaa agcatttcta tattcctcac
1501 gccttaatgt tcacctgcga actcataccg gagagaaacc cttcgtatgt aaagaatgtg
1561 ggaaagcatt tgctgtttcc tcacgcctaa gtagacatga aagaattcac actggggaga
1621 aaccctatga atgcaaggat atgagtgtta ccatttagcc catcggttgc catctttaat
1681 tattggcaat gacaccaaag attatcagat ttgtcctaaa tgccttttgg aggttgtaat
1741 gactcatgga ttggccttag ataccatcct gagggtctga aattaaacct acaggttctg
1801 aatacaacat catggttgcc tgagtctggg catctgtgaa gaagggtcat ggatggtgag
1861 gtcagtactg caggctgcct caccttggtg attagattcc taagatcata gcattaacaa
1921 gttgtgtatg agataaatca tgcagattga ccccagcccc tgttggttag tggctgccag
1981 tgtggcacat ttatgtcaaa atttaccaga agccaagatg atgtaggacc ccaaaggtgg
2041 gttgttaaga gatgctcctc caagggtctc ttctgatccc acggatcctg cagagcgtgt
2101 caggaatgaa accatccata actgccagtg ccctttcaca gctgattatt tctgtgtccc
2161 cttgtaaaat ctaagaagtg tgacagcctt gcctgttctg ccttgtatgt ctattttaga
2221 tggcacaatg taagtggcaa tgtctcttct agtataatcc agtctctctt ctcacttctg
2281 tcaaggtggc tgatatagtc catgaatccc actcatgatc tctttatcag atgatcgttc
2341 agccacactt tgaggattct cttcagtaca agttttctaa tttttgcatt atggataggc
2401 tgagaatttt ccaaatctcc aagttctggt tcctttttcc ttaacaattt tttctgcaat
2461 tcaggtctcc ttttgcattt ttgctgagac cagctgggtc atggagaccc tgacccagca
2521 gctctagagg aattaagaca aagacacaga aatagagtgc agagtgggaa tcggggctca
2581 cagccttcag agctgagagc cttgaacaga gtttgaccca catatttatt gacagtaagc
2641 ctgtgataaa cattatttct atagattata gattagctaa aagtattcct tacaagaaag
2701 aaagggacag gctctggctt gttatctgca acaggaacat gtccttaagg cacaaatcac
2761 tcatggtatt gtttgtggtt taggaatgcc tgagcagttt tccagttttc caccgtgggt
2821 gggccaggtg ttccttgccc tcattcgggt aaaccagcaa cctccagcat gggtgtcata
2881 gccatcacga gcatgtcaca gtgccgcaga gattttgttt atgggcagtt tctcatggcc
2941 tgtttatgtc caaatttggg gggcctgttc tgagcacatt ttcctgtaag cactcaggaa
3001 gaatgaagct tcctgtgtcc tttaacactt taagtacaga tcttagtgat acataaccag
3061 ttttatctct ctcaagctct accttccgca aagtgctaga atacagttct gccaagttct
3121 tcactacttc gtatcaaggg ttgtattttc tttatttccc aatagcatgt tcctcattcc
3181 ccaatgacac ctcaccagga tcacccttac caaccttact tccagcttgc acatcagaat
3241 ttttccagcc tcatttgtca gtttcaaatc tgcttcacat ttttagtttt tttgtttgtt
3301 tgtttttaat ctgccttaat gagctcaggc cactatcaca aaataccaca gaccaaatgg
3361 cttacaaatt tgttaatttt aaataaatga ggttaaaaac aaaaaaaaaa aaaaaaaaaa
3421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//