LOCUS BC032650 1899 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens aprataxin, mRNA (cDNA clone MGC:45060 IMAGE:5505120), complete cds. ACCESSION BC032650 VERSION BC032650.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1899) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1899) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: h Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 28329426. FEATURES Location/Qualifiers source 1..1899 /db_xref="H-InvDB:HIT000092747" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45060 IMAGE:5505120" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1899 /gene="APTX" /gene_synonym="AOA" /gene_synonym="AOA1" /gene_synonym="EAOH" /gene_synonym="EOAHA" /gene_synonym="FHA-HIT" /gene_synonym="FLJ20157" /gene_synonym="MGC1072" /db_xref="GeneID:54840" /db_xref="HGNC:HGNC:15984" /db_xref="MIM:606350" CDS 385..1149 /gene="APTX" /gene_synonym="AOA" /gene_synonym="AOA1" /gene_synonym="EAOH" /gene_synonym="EOAHA" /gene_synonym="FHA-HIT" /gene_synonym="FLJ20157" /gene_synonym="MGC1072" /codon_start=1 /product="aprataxin" /protein_id="AAH32650.1" /db_xref="GeneID:54840" /db_xref="HGNC:HGNC:15984" /db_xref="MIM:606350" /translation="MVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERDAAQEA EAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVV IKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRL GYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVR DGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ" BASE COUNT 503 a 405 c 482 g 509 t ORIGIN 1 ccacgcgtcc gggagattta ttttttttag atgaggtgtt gctgtgttgc ccaagctgga 61 cttgaacccc taggctcaag caatccttcc acctcagtct cccaagtagc agggactaca 121 gagtgatgat gcgggtgtgc tggttggtga gacaggacag ccggcaccag cgaatcagac 181 ttccacattt ggaagcagtt gtgattgggc gtggcccaga gaccaagatc actgataaga 241 aatgttctcg acagcaagtt gaaagcagag tgtaacaagg gatatgtcaa ggtaaagcag 301 gtaggagtca atcccaccag cattgactca gtcgtaattg ggaaggacca agaggtgaag 361 ctgcagcctg gccaggttct ccacatggtg aatgaacttt atccatatat tgtagagttt 421 gaggaagagg caaagaaccc tggcctggaa acacacagga agagaaagag atcaggcaac 481 agtgattcta tagaaaggga tgctgctcag gaagctgagg ctgggacagg gctggaacct 541 gggagcaact ctggccaatg ctctgtgccc ctaaagaagg gaaaagatgc acctatcaaa 601 aaggaatccc tgggccactg gagtcaaggc ttgaagattt ctatgcagga ccccaaaatg 661 caggtttaca aagatgagca ggtggtggtg ataaaggata aatacccaaa ggcccgttac 721 cattggctgg tcttaccgtg gacctccatt tccagtctga aggctgtggc cagggaacac 781 cttgaactcc ttaagcatat gcacactgtg ggggaaaagg tgattgtaga ttttgctggg 841 tccagcaaac tccgcttccg attgggctac cacgccattc cgagtatgag ccatgtacat 901 cttcatgtga tcagccagga ttttgattct ccttgcctta aaaacaaaaa acattggaat 961 tctttcaata cagaatactt cctagaatca caagctgtga tcgagatggt acaagaggct 1021 ggtagagtaa ctgtccgaga tgggatgcct gagctcttga agctgcccct tcgttgtcat 1081 gagtgccagc agctgctgcc ttccattcct cagctgaaag aacatctcag gaagcactgg 1141 acacagtgat tctgcagagc ctgagctgct gctgtggtgt ggcccactgg agcaaactgc 1201 tggcacctat tctgggttgc ttgtgaactt ctactcattt cctaaattaa aacatgcagc 1261 tttttcacaa atttattcta ttattgagtg gccacaatgt agagtggctc aaagtacttc 1321 aggattagga atttgggttt gtcatagatg tattctctgg tgagggtggc tgggatatac 1381 ctgacccacc atcttcagaa ggacccatgt caggtctgac cattgggagc aaagccatgt 1441 tcacactgac ctaatgcaga gtatggaagc attgggctgg ttatacattt ctgtttctta 1501 gatttatcct ccgcctctgt aggcatggac aacctttaat cagagcatct agagtggcct 1561 cttgtttatc ctgaagatac tgatgggtct tgttttctgt tagtctgttt tgtaatattc 1621 ttttcccttc cttcatgggg aggcttagtt tgtccagtcc ttccatgccc ttctatccca 1681 gattacctaa atgttccctt ctcaggaatt ctgtctcatc agttcttcac agtgagaaaa 1741 gaggctagat gatggtgtgg ggggttggag ttttcttcta ataccgaggg ttcctggctg 1801 tgaggaaaca gccacatgtt cgtcatgatt gagctgtgaa gtcttcttgg acctgttgtc 1861 tgaaaataaa gttaatttgt ttgaaaaaaa aaaaaaaaa //