LOCUS BC032628 930 bp mRNA linear HTC 17-NOV-2006 DEFINITION Homo sapiens zinc finger, FYVE domain containing 20, mRNA (cDNA clone IMAGE:5417298), with apparent retained intron. ACCESSION BC032628 VERSION BC032628.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 930) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 930) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: d Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 70980546 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..930 /db_xref="H-InvDB:HIT000092736" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5417298" /tissue_type="Breast, mammary adenocarcinoma." /clone_lib="NIH_MGC_87" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 257 a 204 c 243 g 226 t ORIGIN 1 ccacgcgtcc gccgagcgac cgatggagat ggcggctgcg gctgagtgac ggacggtgga 61 ggcccagagc ccgggcctga agggggggac aaacctgggt gcccgcagga gcccggcagg 121 gtgtcttaca agtatcaaga acttactata tgtggttgaa taaacaatca aggtaaagag 181 catcaagtaa aaacttctgc ttgttgataa gtacttcaga cattccccca gtggctgaag 241 tggcatatga attatgaagt tggatcattt ggaatgaatg taagagaatt gccaagggct 301 cctcctactc cagagaggaa acctcatcca gggccatgaa gccacttcct caccatctgt 361 gtgctgctta agctaatgct gcgggaacca tggttccttg ggaggaatca agctgactct 421 tggcatgaga ttcctgcctt cctagggttg agagcggcac tgccatggct tctctggacg 481 acccagggga agtgagggag ggcttcctct gccctctgtg cctgaaggat ctgcagtctt 541 tctatcagct tcactcacat tacgaggaag aacactcagg ggaagaccgt gatgtcaaag 601 ggcaaattaa aagtaagagg cgaggacctt gcctatcccc tgctgtcgtt gagagcttta 661 actcacggga tagttctcat cagctttggt gttgccacag gaatatgata atagtagtag 721 caaacagatg actagtgttt gtcatgtgcc aggcgttttc agagtttccc tgtttattaa 781 tttcatttaa tcctcacaat aactgtgtgg ctgtaagcca catttcgaac cagacacaga 841 gagattagat aacttgtctg aagccactca gagaaacaat ctgactttga gtctagtaaa 901 tgtaattgct gtgaaaaaaa aaaaaaaaaa //