LOCUS BC032598 2797 bp mRNA linear HUM 01-JUN-2004
DEFINITION Homo sapiens NHL repeat containing 2, mRNA (cDNA clone MGC:45492
IMAGE:5529619), complete cds.
ACCESSION BC032598
VERSION BC032598.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2797)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2797)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2797
/db_xref="H-InvDB:HIT000041626"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45492 IMAGE:5529619"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2797
/gene="NHLRC2"
/gene_synonym="DKFZp779F115"
/gene_synonym="FLJ20147"
/gene_synonym="FLJ25621"
/gene_synonym="FLJ33312"
/gene_synonym="MGC45492"
/db_xref="GeneID:374354"
CDS 83..1186
/gene="NHLRC2"
/gene_synonym="DKFZp779F115"
/gene_synonym="FLJ20147"
/gene_synonym="FLJ25621"
/gene_synonym="FLJ33312"
/gene_synonym="MGC45492"
/codon_start=1
/product="NHLRC2 protein"
/protein_id="AAH32598.1"
/db_xref="GeneID:374354"
/translation="MAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAY
PHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFA
FGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTN
NVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENA
VVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSC
WFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADS
SACMMKAILFSQPLQITDTQQGCIAPVELRYVF"
BASE COUNT 909 a 485 c 500 g 903 t
ORIGIN
1 ccacgcgtcc ggttcccctt gggatgtagt ttttggaaca tcaggttcag aggtccaaag
61 aggtgacatt ttatggatag ccatggcagg gactcatcag atatgggcac tcctgctgga
121 ctctggcaaa ctgccaaaga aaaatgagtt aacaaaagga acctgcctta ggtttgctgg
181 aagtggaaat gaagagaatc gaaacaatgc ctatcctcac aaggcaggtt ttgcccaacc
241 ttcaggcctt tccttggcct ctgaagatcc ctggagctgc ttgtttgtag cagatagtga
301 gagcagtaca gtgagaaccg tttcactgaa agatggagca gtgaagcacc tcgtaggagg
361 agaaagagac cccatgaatt tatttgcttt tggtgatgtt gatggagtag gaatcaatgc
421 aaagcttcaa cacccccttg gagtaacatg ggacaaaaaa aggaatttac tttatgttgc
481 agactcctac aatcacaaga ttaaagttgt ggatccaaaa acaaaaaact gtacaacatt
541 agcaggaact ggagacacaa ataatgttac cagttccagt tttacagagt caacttttaa
601 tgaaccagga ggcttgtgta ttggagagaa tggagaatta ttatatgtag cagacaccaa
661 taatcatcaa attaaagtga tggatttaga aactaaaatg gtatctgtgc tccccatctt
721 cagatctgaa aatgctgtgg tagatggccc gttcctagta gaaaaacaga agacattacc
781 caaactacct aaatctgctc caagcattag gctttccccc gtgactgcgt gtgctggcca
841 gactcttcag ttcaaactca gattagacct cccatcagga tcaaagctaa ctgaaggagt
901 atccagttgc tggtttctaa cagctgaagg caatgaatgg ctacttcaag gacagatagc
961 agctggagat atagagaaca tttccagtca accaacaatt tcactacaaa ttcctgatga
1021 ttgcttatca cttgaagcca ttgtatctgt cagtgtgttt ctttattact gtagtgcaga
1081 cagcagtgct tgtatgatga aggcaatttt gttcagtcag cctttacaaa taacggatac
1141 acagcaaggt tgcatagctc cagtagagct caggtatgta ttttagccag ccagctagct
1201 agcaacccat tgccaccacc tactgtctcc catcctgact atcactgtaa tttaaggaaa
1261 gaaaacttca gttctgcctc tggataccaa gatgcccatt gctcagttca gacaactgat
1321 attaaaataa agctatgctc cttacttact tcttttatta taaacaaatt cctttgcttt
1381 ggctgatact agctgagtca ttgatcatca ttggtaccat gatattgtaa tctatgctgc
1441 tatttggcac aagactgaag ttcacactac agtagagaat actataagat aatttgcaat
1501 aaatactgat aataataata ccagatattt taactaactt tttctacctt tattaatagc
1561 aatcagcaca cttgaatgtg taaatttcac agtaacttta ggcagaactt aagctccagg
1621 ccacatttgt ataagaacac caagtattca aggcataaag tctgttgtaa gccaaaaaaa
1681 agtcttttca tcactgtaga agcttaagga gtacatcagt ggtaaatacg atctttattc
1741 tcttctgtgg ttttctcagt tgagatattt ttaaaagaga gttttgatct atttttatta
1801 taaattattt gttatttaac ataccattat gaatgcctta aaactttgta cagataaagt
1861 tggacataga atctctaagg actgactcct ttaactgttt ttgagtgact acattaccag
1921 ataatgaatg agtccccaga aatattatga ctttcaagga aaaagggact ttaggacaca
1981 ttacttagtg tctgtgataa ataatttatt gtgacagcta aatctgatgg ttacatatct
2041 tgttttggaa atgtacattt cacttgtaag cattaaatgc agatttgttg agtttaggtt
2101 ttgaggtttt tttcgttccc atattcagaa tttaaattat gatcatttat tgtgatgttt
2161 ttaaaaatca cttttaagcc ttaaaagtga aattttcagt gtgaggtgct ttcatgctat
2221 taatagatac agtatatcct aatatattag tcttcaaaat attaaggccg aaacagtgat
2281 ttaatgatac tattttttaa tttttgttgt tttttatccc taaaaaaaga tattggaaag
2341 gttttttttc tattgtcata atttataact acttaaaagc ctaatcttgt tttccttaag
2401 acctattcaa catgtttgtg atttaatcag cttacaaggg tttaaaaaca tcaggtgaac
2461 catgtttatt tattcagtaa atatttatag acaatatggc ataatatgct tcccttccct
2521 gtaaaaacag tgctaaattt gaagtgtaat cttttttaaa catcattgtc tatttttaat
2581 tttgtttgaa atgtagtatt agtttgtttt attcataagg ttagctgaat ctctgaagta
2641 aggatgtata aatcatgaca ttgatttaat tagtcatcta ctgaagctac ttttaaagag
2701 aaatatagat ataaaattaa aaggaatcct gtttaaaatt atatgtaatt acctcataaa
2761 ccttttctct ccacaagcaa tcaaaaaaaa aaaaaaa
//