LOCUS       BC032587                2918 bp    mRNA    linear   HUM 19-MAR-2009
DEFINITION  Homo sapiens tubby like protein 3, mRNA (cDNA clone MGC:45295
            IMAGE:5501868), complete cds.
ACCESSION   BC032587
VERSION     BC032587.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2918)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 69 Row: g Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 42544229
            The stop codon of the CDS annotated on this record is located > 55
            bases upstream of a splice junction, and therefore the mRNA is
            predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES             Location/Qualifiers
     source          1..2918
                     /db_xref="H-InvDB:HIT000041619"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:45295 IMAGE:5501868"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2918
                     /gene="TULP3"
                     /gene_synonym="TUBL3"
                     /db_xref="GeneID:7289"
                     /db_xref="HGNC:HGNC:12425"
                     /db_xref="MIM:604730"
     CDS             55..1383
                     /gene="TULP3"
                     /gene_synonym="TUBL3"
                     /codon_start=1
                     /product="tubby like protein 3"
                     /protein_id="AAH32587.1"
                     /db_xref="GeneID:7289"
                     /db_xref="HGNC:HGNC:12425"
                     /db_xref="MIM:604730"
                     /translation="MEASRCRLSPSGDSVFHEEMMKMRQAKLDYQRLLLEKRQRKKRL
                     EPFMVQPNPEARLRRAKPRASDEQTPLVNCHTPHSNVILHGIDGPAAVLKPDEVHAPS
                     VSSSVVEEDAENTVDTASKPGLQERLQKHDISESVNFDEETDGISQSACLERPNSASS
                     QNSTDTGTSGSATAAQPADNLLGDIDYLEDFVYSPAPQGVTVRCRIIRDKRGMDRGLF
                     PTYYMYLEKEENQKIFLLAARKRKKSKTANYLISIDPVDLSREGESYVGKLRSNLMGT
                     KFTVYDRGICPMKGRGLVGAAHTRQELAAISYETNVLGFKGPRKMSVIIPGMTLNHKQ
                     IPYQPQNNHDSLLSRWQNRTMENLVELHNKAPVWNSDTQSYVLNFRGRVTQASVKNFQ
                     IVHKNDPDYIVMQFGRVADDVFTLDYNYPLCAVQAFGIGLSSFDSKLACE"
BASE COUNT          785 a          738 c          683 g          712 t
ORIGIN      
        1 ccacgcgtcc gggggaagag tgtgtacgtg gtgggggctt cctcggtggc gggcatggag
       61 gcttcgcgct gccggctcag tcccagcggc gacagtgtct tccatgaaga aatgatgaag
      121 atgcgacagg ctaagctgga ttatcagagg ctactacttg agaagaggca aaggaaaaag
      181 cgccttgagc catttatggt gcagcccaat ccagaagcca ggctacgtcg ggcaaagcca
      241 agggccagtg atgagcagac tcccttggtg aactgtcata ctccccacag caatgtcatc
      301 ttacatggta ttgatggtcc agctgctgtc ctgaaaccag acgaagttca tgctccatca
      361 gtaagctcct ctgttgtgga agaagatgct gaaaacaccg tggatactgc ttccaagcca
      421 ggacttcagg agcgtctcca aaagcatgat atctctgaaa gtgtgaactt cgatgaggag
      481 actgatggaa tatcccagtc agcatgttta gaaagaccca attctgcatc aagccagaat
      541 tcaaccgata caggcacttc cggttctgct actgccgccc aaccagctga taacctcctg
      601 ggagacatag actacctgga ggactttgtg tatagtcctg cccctcaagg tgtcacagta
      661 agatgtcgga taatccggga taaaagggga atggatcggg gtctcttccc cacctactat
      721 atgtacttgg aaaaagaaga aaatcagaag atatttcttc ttgcagctag aaagcggaaa
      781 aagagcaaaa cagccaacta ccttatctcc attgatccag ttgatttatc tcgtgaagga
      841 gaaagttatg tcggcaagct tagatccaac ctcatgggga ccaagtttac agtttatgac
      901 cgtggcatct gccccatgaa gggccggggt ttggtaggag cggcccacac ccggcaggag
      961 ctggctgcca tctcctatga aacaaacgta cttggattta aaggtcctag gaaaatgtct
     1021 gtgatcattc ctggaatgac actgaatcat aagcagatcc cctatcagcc acaaaacaac
     1081 catgacagtt tgctctcaag gtggcagaac agaactatgg aaaatctggt tgagctgcac
     1141 aacaaggccc ccgtctggaa cagtgacact cagtcctatg tcctcaactt ccgtggccgg
     1201 gtcactcagg cgtctgtgaa gaacttccag atagtccaca aaaatgaccc tgattatata
     1261 gtcatgcagt ttggacgtgt ggcagatgac gtgttcacac tggattacaa ctacccactt
     1321 tgtgcagtac aggcctttgg catcggtctt tctagctttg acagtaagct ggcgtgtgaa
     1381 tgagagaaca gtcaggcagg gagcccttct ccccacagag ctttcaggag cagacagtgg
     1441 cctccccttc ccctccctgc cccaggactt aaagagcaat agtttgcccc ttttggaatg
     1501 atctctgaat atataaaaca cacacacaaa gagcaatagt ttgccccttt tggaacgacc
     1561 cctgaatata taaaacacac acacaccccg cgcactctca ctccttttcc aggtttcata
     1621 gacttggtga gggatcacag cttagcatgg gtgagagatg atttaaagca cagggagatt
     1681 cttgtcacat tggggtctcc aaagctagaa tgggatttca tgtgcttgga aacttgcagt
     1741 agaatcaggg actgacatcg cagttcctct cctctcttca ttccctcaca gcagattggc
     1801 cggcaccaat cttagtcaag agtggctgtg atcacatttg tgatcaatta tgtgagaatt
     1861 ttatataatt gtcttcattt caattaaggc tgaaagcata aactctagag gtgactcagt
     1921 caggactgac agtaatgtga taattgcctt cattttcaac ccaggagtgc ctctcacagc
     1981 tatatgacta cggatccatt agtgaggagc gacacacaca cctgtaggca tcctgtgcaa
     2041 acactttgtc attatcaaga gagatggcag tattgaccat ttagtttagt taaaaaaaaa
     2101 aaaaaaaagg tggcaggaga ggctttgggg aggatcagcc agcagacatg agcactgctg
     2161 gcccgtgtgg cagagctgtg gactttcttc tcggctccct caaccctggc tcaggcacag
     2221 aaggtgtttt gctacgtttt tttgattatt acacccctcc acgtattatg tgactcttac
     2281 accagttcac ccttcccaga atgtatccaa accttgagaa tgcaggagct ctgtgagctc
     2341 caccgtcagc accattcagc tgcatccctt gtgcacagaa ctgtttgcca gcgttgggtg
     2401 ggacacccgt ggcggctgct ccctcagacc tcccttctgt ggactgacct ctcacctccg
     2461 cctgttgttc ctgcaccaca tcagataagc atgtgaagga gggccaactg gcagctgcgg
     2521 gacccttggc ttgtccccca ccgacaagtc ccacctgctg ggtgaggacg agactgtttc
     2581 catctcaggc atgtatccca ccaagtgcct ccctcacagc catgcccaga agcctcacac
     2641 ctcgtcacca ccaccacccc ccaccccatc ctgaggcact gcctggcaga taaccctggt
     2701 tggccacaga agctattaat acacgacagc atgtggggaa ggacttatgg tgggccaggt
     2761 ggacctcatc ctgcttcttc ctccctctgg tttaaagaga tatataaact aatttcacat
     2821 aatttgtgtg tgcaggtgat tggtttttac ataagtccta tttatacctt ttatatgtta
     2881 cagaaataaa agttaattta tataaaaaaa aaaaaaaa
//