LOCUS BC032574 1703 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase,
polypeptide 4, mRNA (cDNA clone MGC:44861 IMAGE:5247350), complete
cds.
ACCESSION BC032574
VERSION BC032574.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1703)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51702476.
FEATURES Location/Qualifiers
source 1..1703
/db_xref="H-InvDB:HIT000041611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44861 IMAGE:5247350"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1703
/gene="B3GALT4"
/gene_synonym="beta3Gal-T4"
/gene_synonym="beta3GALT4"
/gene_synonym="DJ1033B10.3"
/gene_synonym="Gal-T2"
/gene_synonym="GalT4"
/db_xref="GeneID:8705"
/db_xref="HGNC:HGNC:919"
/db_xref="MIM:603095"
CDS 262..1398
/gene="B3GALT4"
/gene_synonym="beta3Gal-T4"
/gene_synonym="beta3GALT4"
/gene_synonym="DJ1033B10.3"
/gene_synonym="Gal-T2"
/gene_synonym="GalT4"
/codon_start=1
/product="UDP-Gal:betaGlcNAc beta
1,3-galactosyltransferase, polypeptide 4"
/protein_id="AAH32574.1"
/db_xref="GeneID:8705"
/db_xref="HGNC:HGNC:919"
/db_xref="MIM:603095"
/translation="MQLRLFRRLLLAALLLVIVWTLFGPSGLGEELLSLSLASLLPAP
ASPGPPLALPRLLIPNQEACSGPGAPPFLLILVCTAPENLNQRNAIRASWGGLREARG
LRVQTLFLLGEPNAQHPVWGSQGSDLASESAAQGDILQAAFQDSYRNLTLKTLSGLNW
AEKHCPMARYVLKTDDDVYVNVPELVSELVLRGGRWGQWERSTEPQREAEQEGGQVLH
SEEVPLLYLGRVHWRVNPSRTPGGRHRVSEEQWPHTWGPFPPYASGTGYVLSASAVQL
ILKVASRAPLLPLEDVFVGVSARRGGLAPTQCVKLAGATHYPLDRCCYGKFLLTSHRL
DPWKMQEAWKLVGGSDGERTAPFCSWFQGVLGILRCRAIAWLQS"
BASE COUNT 335 a 542 c 522 g 304 t
ORIGIN
1 gagtgccgca gtcggccagc catggagcgg agcttgctgg cggcgaggcc gcggcgacaa
61 ggtagccacc cccgcagcat gcctcgaccg cggtccgcag ctgcaccgcc tctccccgcc
121 ccccagggtg cgctggtccc ggtcgcgcgc tcagacctcc gcatcccggg cgtggtcggt
181 taagtccccg gccgtgaccc aggcccgggg agctagtctc cgcccttcgc tcttacggat
241 cccctcggag tacgccgcac catgcagctc aggctcttcc ggcgcctcct tctcgccgct
301 ttgctgctgg tgatcgtctg gaccctcttc gggccttcgg ggttggggga ggagctgctg
361 agcctctcac tagcctccct gctcccagcc cccgcctcac cggggccgcc cctggccctg
421 ccccgcctct tgatccccaa ccaggaagct tgcagtggtc ccggggcccc tcccttcctg
481 ctcatcctgg tgtgcacggc tccggagaac ctgaaccaga gaaacgccat tcgggcttcg
541 tggggcgggc tgcgcgaggc ccgggggctc agggtacaga cgctattctt gctgggagag
601 ccgaacgcac agcaccccgt gtggggttcc caggggagtg acctggcctc ggagtcagca
661 gcccaggggg atatcttgca ggccgccttc caggactcct accgcaacct caccctaaag
721 accctcagcg ggctgaactg ggctgagaaa cactgcccca tggcccgata cgtcctcaag
781 acggacgatg atgtgtatgt caacgtccct gaactggtat cagagctggt cttgcgaggg
841 ggccgttggg ggcaatggga gagaagcacg gaaccccaga gagaggctga gcaggaagga
901 ggccaggttt tgcacagcga ggaagtgcct cttctgtact tgggccgggt gcactggcgc
961 gtgaacccct ctcggacacc ggggggcagg caccgcgtat cagaggagca gtggcctcac
1021 acctggggcc cctttccacc ctatgcctca ggcacggggt atgtgctgtc agcgtctgct
1081 gtgcagctca ttctcaaggt ggccagccgg gcaccccttc tcccattaga ggatgtcttt
1141 gtgggggtaa gtgcccgacg aggaggcctc gccccaacac agtgtgtcaa gctggctggt
1201 gccacccact acccgctaga ccggtgctgc tatgggaaat tcctgctgac gtcccacagg
1261 ctggacccct ggaagatgca ggaagcctgg aagctggtgg gtggctctga cggggaaagg
1321 actgcgccct tttgctcctg gttccaggga gtcctgggca tcctgcggtg tcgagcaata
1381 gcctggcttc agagctgaga gtgcctgggg ccacaggaaa ggcaggaaca ggaccttctc
1441 tctcccaggc ccaacgcagg ggccctcact ggctgcagct gatctgtttc cttataccag
1501 atcctcagtc tcactaaaga cagcgatatg ggagacaccc aggggcctgg cccgccagcc
1561 caaaagatgg tcatcgggaa gaaaaaaaga aaaaaatgct gcagttgttc tctcaagcta
1621 gggcagaaga ggggtgtcaa gctcctcaat aaacttgtct ccacttcaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaa
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