LOCUS BC032563 3746 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
clone IMAGE:5579440), complete cds.
ACCESSION BC032563
VERSION BC032563.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3746)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3746)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: o Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3746
/db_xref="H-InvDB:HIT000041605"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5579440"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3746
/gene="CLASP1"
/gene_synonym="KIAA0622"
/gene_synonym="MAST1"
/db_xref="GeneID:23332"
/db_xref="MIM:605852"
CDS 187..636
/gene="CLASP1"
/gene_synonym="KIAA0622"
/gene_synonym="MAST1"
/codon_start=1
/product="CLASP1 protein"
/protein_id="AAH32563.1"
/db_xref="GeneID:23332"
/db_xref="MIM:605852"
/translation="MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQT
ADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAI
YSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS"
BASE COUNT 990 a 881 c 851 g 1024 t
ORIGIN
1 ccacgcgtcc gcacgcggga agacagcctt ggtgtctggg aggagcactt caagaccatt
61 ctgctcctgc tgctggagac ccttggagac aaagaccatt caattcgagc actggcgtta
121 agagttttga gggaaattct gagaaatcaa ccagcaagat ttaaaaacta cgccgagctg
181 acgattatga agactctgga agcccacaaa gactcccata aggaggtggt gagagcggct
241 gaggaggctg cgtccacact ggccagttcc atccacccgg agcagtgcat caaggtgctc
301 tgccccatca tccagacggc cgactacccc atcaaccttg ctgccatcaa gatgcagacc
361 aaagtcgtcg agaggatcgc aaaggagtca ttgctgcagc tccttgtcga catcatccca
421 ggcttgctgc agggttatga caacaccgaa agtagtgtgc gtaaggccag cgtgttttgc
481 ttagtggcaa tttattccgt aatcggagaa gacctgaaac ctcaccttgc acagctcaca
541 gggagcaaga tgaagctact aaacttatac ataaagaggg cccagaccac caacagcaac
601 agcagctcct cctccgatgt ctccacgcac agctaatggc agtacctgtc tcttgtgtag
661 acctagaagc aatcggtggt gcctctcaga gacctttccc cacccccttc atcggctgcc
721 cagtcagtac aaggaggccc acaaatattt attacaatca gtattttggt cccttccagc
781 ttttctgtag aatcttactg gtattgaatg taaaggaagc aaggcctgta ttgcagtctt
841 catacaaaac aaaaggaata agaacagaaa agagccatac tgaaacatgt cttgtacagc
901 ctgctgagat ggcgaaaccc tgtgtgtggg gtgcagtttt taaaaatcag agcgctctag
961 ccactacttg gtagaaagta gcattttttt tttcagttaa taacatattt gggggtgggg
1021 tggggtgtta ctttgtgttc ttcctcctta gcctattttc ttgtgcgtat ggtctgtgtg
1081 gggccccttt cacagctgac accacgaaag gtgatatatc tttaagttgt gttctgagac
1141 ctactaaaaa tgggaatcaa gtcttggcaa gaacagtctg aagatggcct tttaacaaac
1201 gctgggaatt ttgcttgtca tatccagact ggaggccgac tgccctggct ttcagcgtag
1261 aattgggagt gcaccctgac agtctccttc cagctctccc taatcgactc caccgacaag
1321 gtccctaccc cagagcttcc atgcaaagga attcttcaag tttaaatctg gacacaaaaa
1381 taagataaat gtatggcatc atttagggat gcctgagatg gcagttcatg aagcacagaa
1441 gataaagaag aagtctttca tctttactgc tgagatcctt gggaacactg ttgtcatggg
1501 ggctctgcca agaccctcat ctctgggcta cacggtgatt cagattgagc accaacttgt
1561 ttcctcccct caaagttctg cctaagccgt tcagttctaa catggtctca gttaatctgg
1621 taaatggcat ctttaccatc ttagttctga cttctcagtt taatgtggga ttaagagcca
1681 agaaaagcct agagagactg gatatcacaa ttttttttaa ttttataaac tgaagtagtt
1741 ccttgaatgt ctgttgatga aatagtcact gtttaaggaa aaaagtaatt atgaggtgta
1801 gcagattgca gaaaaacagg attagaaaca cacttaaaaa gaacacacat ttagagtctc
1861 tcttcctcct cagcgaacca ctaggccccc tttttaaaaa cacctttaga gcctaattac
1921 tccaataaaa gtaactagag gtttggagtc tggttaaata aattctgagt aaaattctta
1981 agccaaatgg aaattcttaa tgcaatcatg aggacttcta ttgtctctta ctgttgtatt
2041 agatcctata aattgaactg atttttccat aaggaaaatg cttcttttga gattaattct
2101 aataacgtat ttgctattgc agtgcagagc ccactgcaac tgctaggact gaaagcagag
2161 gctgggtgcc agagcacgtg attcttaaca tcatttccac agacccctct gccctgaccc
2221 tctgcattgg atgcaggaag ctgggaaaga ctgatgttga tttggaaaca tgggctgaaa
2281 atgaaggccc catagtgcat aggaacagta aagccagggt gctgacgtgt gtgtgtgtgt
2341 gtgtgtgtgt gtgtgtgtgt gtgtggtgtt gtgtgtgttt gtgcgtgcac cctacacatg
2401 tgtggtacct cactgctgct gtttagggaa cttgagggac gcgtttcaag gggttgggta
2461 ttactgacga gctttggctc aaaatatagc aggaccaggt cttttgttga taagtactgt
2521 ttgtttatta atatgtcatt aatggtattt cttttttaca ctctacaagt gaattaggga
2581 gtctcttgtt gacccctttg ttgcaggaat gtgcgtcggg ctaggttatc catgagtttc
2641 tttattccta atgcagttag aaagaccttt ctccttgagc tctttgactc ccagaaggta
2701 ccccagtccc cagtgtactt agaaaggatc tcgaacattg ctggacgtcc tcatagtact
2761 cacaaagggc tagccttgaa tgtcactcgc ccagtcttca gtctcctgac ttagagatac
2821 aatcacgtca caggtctctt ggcctcaatc tgaaaactgc tgccgccgcg ccgaggagac
2881 tcgcatgccg ccaccacctc actgggaggg cgccgagccc accgtcgccc cctagaccct
2941 gacagctgca gctgccttgc cttgccgccg cctccctgca gggcccctgt tccaatgaaa
3001 aacagaacac aaaagagcag agcacctaag cctgtctctg cctccctgtc taccggactg
3061 gccagggccc aagacccccg ctgctccact gcggggctgg gcgggctgac tccctgcttc
3121 ctccaagctg ctgcctcccc tgcagccagg gtctgggcag ggtgcagccg gtcctcgggg
3181 cacgcagctt ccttcaagta cactgtgtgt gcttcccgga cctgcggcga tgccacgggc
3241 ctgccttttc tatgcgcctc actagcttac caccctgtgc aggtaatgca actgactttg
3301 tctcatcagt ctttttcttt ccctgccacc ctttatttat caagcgtaat gttacacttt
3361 aaaggacagc aaataagaac tttgtagaat cccaccagga ctttgctaac aataatgttt
3421 ggaaataaag aagtgctctg aaaaaatatc agccaccaaa atagttatgt tggcactgtg
3481 ttcacacgca tggtccccac acccccaggt tgggtgggtt tttttgtttt ttgggttttt
3541 ttgggggggg ggctttttca tgttacatcc atatctgtat ttatatctta tttgtttcac
3601 tttcaagtgt atcatggcaa atgtacagat ttttttgtta ataatgtgct aggatttgct
3661 aaaaaagaaa aaaaaaaaac ccttttgagt ttgccctaga ataaatgaga cttaattcaa
3721 aaaaaaaaaa aaaaaaaaaa aaaaaa
//