LOCUS BC032559 2519 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens BAI1-associated protein 2, mRNA (cDNA clone MGC:45218
IMAGE:5562784), complete cds.
ACCESSION BC032559
VERSION BC032559.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2519)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453564.
FEATURES Location/Qualifiers
source 1..2519
/db_xref="H-InvDB:HIT000041603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45218 IMAGE:5562784"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2519
/gene="BAIAP2"
/gene_synonym="BAP2"
/gene_synonym="IRSP53"
/db_xref="GeneID:10458"
/db_xref="MIM:605475"
CDS 107..1645
/gene="BAIAP2"
/gene_synonym="BAP2"
/gene_synonym="IRSP53"
/codon_start=1
/product="BAIAP2 protein"
/protein_id="AAH32559.1"
/db_xref="GeneID:10458"
/db_xref="MIM:605475"
/translation="MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAG
VTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELL
TQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDK
ELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKEL
LAQKLPLWQQACADPSKIPERAVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKP
LPVPPELAPFVGRMSAQESTPIMNGVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLS
DSYSNTLPVRKSVTPKNSYATTENKTLPRSSSMAAGLERNGRMRVKAIFSHAAGDNST
LLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVLDSDGSDRLHMSLQQG
KSSSTGNLLDKDDLAIPPPDYGAASRAFPAQTASGFKQRPYSVAVPAFSQGLDDYGAR
SMSR"
misc_feature 122..781
/gene="BAIAP2"
/gene_synonym="BAP2"
/gene_synonym="IRSP53"
/note="SbcC; Region: ATPase involved in DNA repair [DNA
replication, recombination, and repair]"
/db_xref="CDD:COG0419"
misc_feature 1229..1411
/gene="BAIAP2"
/gene_synonym="BAP2"
/gene_synonym="IRSP53"
/note="SH3; Region: Src homology 3 domains"
/db_xref="CDD:smart00326"
BASE COUNT 487 a 811 c 751 g 470 t
ORIGIN
1 ccacgcgtcc ggtccgcttt cgtctccgtc ctgctgccgt taccgccgct gctgccgccg
61 cttgcgtccc ccgctccggt ctgtggtgca gccgggaccc aggaccatgt ctctgtctcg
121 ctcagaggag atgcaccggc tcacggaaaa tgtctataag accatcatgg agcagttcaa
181 ccctagcctc cggaacttca tcgccatggg gaagaattac gagaaggcac tggcaggtgt
241 gacgtatgca gccaaaggct actttgacgc cctggtgaag atgggggagc tggccagcga
301 gagccagggc tccaaagaac tcggagacgt tctcttccag atggctgaag tccacaggca
361 gatccagaat cagctggaag aaatgctgaa gtcttttcac aacgagctgc ttacgcagct
421 ggagcagaag gtggagctgg actccaggta tctgagtgct gcgctgaaga aataccagac
481 tgagcaaagg agcaaaggcg acgccctgga caagtgtcag gctgagctga agaagcttcg
541 gaagaagagc cagggcagca agaatcctca gaagtactcg gacaaggagc tgcagtacat
601 cgacgccatc agcaacaagc agggcgagct ggagaattac gtgtccgacg gctacaagac
661 cgcactgaca gaggagcgca ggcgcttctg cttcctggtg gagaagcagt gcgccgtggc
721 caagaactcc gcggcctacc actccaaggg caaggagctg ctggcgcaga agctgccgct
781 gtggcaacag gcctgtgccg accccagcaa gatcccggag cgcgcggtgc agctcatgca
841 gcaggtggcc agcaacggcg ccaccctccc cagcgccctg tcggcctcca agtccaacct
901 ggtcatttcc gaccccattc cgggggccaa gcccctgccg gtgccccccg agctggcacc
961 gttcgtgggg cggatgtctg cccaggagag cacacccatc atgaacggcg tcacaggccc
1021 ggatggcgag gactacagcc cgtgggctga ccgcaaggct gcccagccca aatccctgtc
1081 tcctccgcag tctcagagca agctcagcga ctcctactcc aacacactcc ccgtgcgcaa
1141 gagcgtgacc ccaaaaaaca gctatgccac caccgagaac aagactctgc ctcgctcgag
1201 ctccatggca gccggcctgg agcgcaatgg ccgtatgcgg gtgaaggcca tcttctccca
1261 cgctgctggg gacaacagca ccctcctgag cttcaaggag ggtgacctca ttaccctgct
1321 ggtgcctgag gcccgcgatg gctggcacta cggagagagt gagaagacca agatgcgggg
1381 ctggtttccc ttctcctaca cccgggtctt ggacagcgat ggcagtgaca ggctgcacat
1441 gagcctgcag caagggaaga gcagcagcac gggcaacctc ctggacaagg acgacctggc
1501 catcccaccc cccgattacg gcgccgcctc ccgggccttc cccgcccaga cggccagcgg
1561 cttcaagcag aggccctaca gtgtggccgt gcccgccttc tcccagggcc tggatgacta
1621 tggagcgcgg tccatgagca ggtaagggga ctttcagacc tgtctttggg accgtgggtg
1681 ggtgtgaaga ggccgggtgg ggcaggtccc tctgctagga cctggggcca cctcttttcc
1741 tttagggccc agcctggccc ttcacccctg tcagagccgg ggatgtccct tagggcgtcc
1801 tgctttctcc gagtgacacg ggaacccccc tgggccctgc ccctctttca tcgcatctgg
1861 ccggccccat ccatccctgt caggcaaggt tggggagggt agctgaggct ggcatccatg
1921 gctggggctg cagcctcctc tgccccaatc tgtgctccgc ccttgtcctg ggtcttcctg
1981 gagggtcagg aggccaacgg gagctgctga aaggggcatt gctcggtgct ggcggactcg
2041 ccgcctgtgg ctgggcagcg tcgtgcagcc aggcagccgt cctgtgcttt gtttcacagt
2101 ggcagcggca cgctggtgtc cacagtgtga ggacgctgac cccgggcagc cgctgctctg
2161 aagagcttcc gcgccttccc cctggtctcg tccgttttcc tcctcagctc tcgctggttt
2221 gttcttgggt tgtttttctt ttccacctgc cccatgcctt ttggttggtg accccagact
2281 ctgtgatccc ccagggtcca tggtgctgct ccatccgccc cccctcccct gtgtttacgc
2341 gccccatcct gtgtgtccca gccttttgag cagaaactgc caggcaggac ctgctgggcc
2401 gtgcggggca ccctcggcct caccctgcag tgtctgtggc actcactgct tttctaaggc
2461 tcgccgtgag ccaggtctaa agtttgaaga aaaagaaaaa tcttaaaaaa aaaaaaaaa
//