LOCUS BC032555 3245 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neuroligin 1, mRNA (cDNA clone MGC:45115
IMAGE:5558890), complete cds.
ACCESSION BC032555
VERSION BC032555.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317253.
FEATURES Location/Qualifiers
source 1..3245
/db_xref="H-InvDB:HIT000041600"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45115 IMAGE:5558890"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3245
/gene="NLGN1"
/gene_synonym="KIAA1070"
/gene_synonym="MGC45115"
/db_xref="GeneID:22871"
/db_xref="HGNC:HGNC:14291"
/db_xref="MIM:600568"
CDS 435..2906
/gene="NLGN1"
/gene_synonym="KIAA1070"
/gene_synonym="MGC45115"
/codon_start=1
/product="neuroligin 1"
/protein_id="AAH32555.1"
/db_xref="GeneID:22871"
/db_xref="HGNC:HGNC:14291"
/db_xref="MIM:600568"
/translation="MALPRCTWPNYVWRAVMACLVHRGLGAPLTLCMLGCLLQAGHVL
SQKLDDVDPLVATNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPS
PWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYV
PTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFL
STGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS
EGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKVGCNVSDTVELVECL
QKKPYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEG
LKFVENIVDSDDGISASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRHNPE
TRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDE
VPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTK
PNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDISQYTS
TTTKVPSTDITFRPTRKNSVPVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTIAV
GASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDVPLMTPNTITMIPNTIPGIQPLHTFN
TFTGGQNNTLPHPHPHPHSHSTTRV"
BASE COUNT 988 a 697 c 676 g 884 t
ORIGIN
1 ccacgcgtcc gccaccgact cctgcccgcc tcaacacaat gccttacctg tgaagcttga
61 ggccactcaa gttccaaatt tgtgacaaat cccccagggc tcactggagt ggcagatata
121 gacctgcagc taactggatt tgatttataa gagagaaatc tgcagtcaat gcccactctt
181 gccacactgc taatatggaa aacagaatgt tcaataggat atggtctgat aaatagtgat
241 gattgaagat gctgctccaa tacatgtgaa atcaatggga gatatctgct gtccgaagat
301 ctttcagagc ttttctcgac aagctcccct gtaagaaatc ggaggtatat tctaccatta
361 tacagtcttt ctcaagtgga tataaatacg tttgcctcac tgtaaccaga caactagaca
421 actaatgtgg gaccatggca ctgcccagat gcacgtggcc aaattatgtt tggagagcag
481 tgatggcatg cttggtacac cggggattgg gtgccccatt gactctctgt atgttgggat
541 gtttgcttca ggctggccat gtgctatcac aaaaattgga tgatgtggac ccactggtgg
601 ctaccaactt tggaaagata agagggatta agaaggaact caataatgaa attttggggc
661 ctgttattca atttcttggg gttccatatg cagccccacc aacaggggaa cgtcgttttc
721 agcctccaga accaccatct ccctggtcag atatcagaaa tgccactcaa tttgctcctg
781 tgtgtcccca gaatatcatt gatggcagat tgccagaagt catgcttcct gtgtggttta
841 ctaataactt ggatgtggtt tcatcatatg tgcaagacca gagcgaagac tgcctatatt
901 taaatatata tgtcccgact gaggatgata ttcgggacag tgggggtccc aaaccagtga
961 tggtgtatat ccatggtggc tcatatatgg aaggtactgg aaatttatat gatggaagtg
1021 tcttggcaag ttatggcaat gtgatcgtca tcacagtcaa ctatcgactt ggagtactcg
1081 gtttcttgag tacaggcgat caggctgcaa aggggaacta tggactcctt gatctcatac
1141 aagctttaag atggactagt gaaaacattg gattctttgg tggtgacccc ttaagaatca
1201 ctgtttttgg atctggtgct gggggttcat gtgtcaacct gctgacttta tcccattatt
1261 ctgaaggtaa ccgttggagc aattcaacca aaggactttt tcaacgagca atagctcaaa
1321 gtggaacagc cctttccagc tgggctgtta gttttcaacc tgcaaaatat gctagaatgt
1381 tggccacaaa agttggttgc aatgtttcag atacagtaga gttagtggaa tgcctacaga
1441 agaagcctta caaagaactt gttgaccaag atattcaacc agctcgatac cacatagcct
1501 ttggacctgt gattgatggt gatgtaatac cagacgaccc ccagatattg atggagcaag
1561 gagagtttct caactatgat ataatgttag gagtgaacca aggggaaggg ttaaaatttg
1621 ttgaaaatat agtagatagc gatgatggta tatcagctag tgattttgac tttgctgttt
1681 caaattttgt tgataattta tatggatatc ctgaaggcaa agatgttttg agagaaacca
1741 ttaagttcat gtatactgac tgggctgacc gtcataaccc tgaaaccaga agaaagacat
1801 tactggcttt gtttacggac catcagtggg tggcaccagc tgtagccaca gcggatcttc
1861 actcaaactt tggttcacct acgtacttct atgcctttta ccatcattgc caaacagatc
1921 aggttccagc ttgggctgat gcagcccacg gagacgaggt tccctatgta ctgggaatcc
1981 ccatgattgg ccctacagag ttatttcctt gcaatttctc caaaaatgat gtgatgctga
2041 gtgcagttgt aatgacatac tggacaaatt ttgctaaaac tggtgaccca aatcaaccag
2101 tccctcaaga cacgaaattc attcatacca aacccaaccg ttttgaagaa gtagcatgga
2161 ccagatattc ccagaaagac caactttatc tccatattgg attaaaacca agagttaaag
2221 aacattacag agccaataag gtgaacctct ggttggagtt ggtacctcat ctgcataatc
2281 tcaatgacat ttctcagtat acctctacaa caactaaagt gccatcaact gacatcactt
2341 tcagacctac gagaaaaaat tctgtacctg tcacgtcagc ctttcccact gccaagcagg
2401 atgatcccaa acaacaacca agtccatttt cagtggatca aagggactac tcaacagagc
2461 tgagtgtcac tattgcagtt ggagcatcac tgctgtttct gaacatcttg gcctttgcag
2521 ccctgtacta caaaaaggat aagaggagac atgatgttca caggagatgc agccctcagc
2581 gcactactac caatgatcta acccatgcac aagaagagga aatcatgtcc ctccaaatga
2641 agcacactga tttggatcat gaatgtgagt ccattcatcc acatgaggtg gttcttcgga
2701 ccgcctgtcc cccagattac acactagcta tgaggaggtc acctgatgat gttcccttaa
2761 tgacacccaa caccattaca atgattccca acactatacc agggattcag cccttacaca
2821 cattcaatac atttactgga ggacagaaca atactctgcc ccatccccat ccccaccccc
2881 attcacattc aacaaccagg gtatagccag ataagagaaa caaactattt tttttgatgg
2941 attgcagtaa acgatcactg aagattcctt ggctttcaac ctacaagact tactatttaa
3001 ataaggagga atattatgtg aatatacata tcaagaactt tgggggtttt gaaaaaaatg
3061 aattgtatat atacaaatca actttaaaaa caaatttcaa ttgcttgaag caattgttct
3121 gaatgatact ttttcattca cattcaagaa ttaatttttt gaagatttaa gttacataat
3181 ggaattaggc atgtggaaca ccaaacagga aagaactatg tctgaaatat aaaaaaaaaa
3241 aaaaa
//