LOCUS BC032522 1155 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens mitochondrial ribosomal protein L47, mRNA (cDNA clone
MGC:45403 IMAGE:5500168), complete cds.
ACCESSION BC032522
VERSION BC032522.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1155)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1155)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1155
/db_xref="H-InvDB:HIT000041582"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45403 IMAGE:5500168"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1155
/gene="MRPL47"
/gene_synonym="CGI-204"
/gene_synonym="MGC45403"
/db_xref="GeneID:57129"
CDS 16..708
/gene="MRPL47"
/gene_synonym="CGI-204"
/gene_synonym="MGC45403"
/codon_start=1
/product="MRPL47 protein"
/protein_id="AAH32522.1"
/db_xref="GeneID:57129"
/translation="MAAAGLALLCRRVSSALKSSRSLITPQVPACTGLLHTTLSRKGL
EEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQ
RLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDIFGRIIWHK
FKQWVIPWHLNKRYNRKRFFALPYVDHFLRLEREKRARIKARKENLERKKAKILLKKF
PHLAEAQKSSLV"
BASE COUNT 402 a 196 c 246 g 311 t
ORIGIN
1 ccacgcgtcc gaaacatggc tgcggccggt ttggcccttc tttgtaggag agtttcatcc
61 gccctgaaat cttcccgatc gttaataact cctcaggtcc ctgcctgcac aggattactt
121 cataccacat tgtcaaggaa aggactagaa gaattttttg atgacccaaa aaactggggg
181 caagaaaaag taaaatctgg agcagcatgg acctgtcagc aactaaggaa caaaagtaat
241 gaagatttac acaaactttg gtatgtctta ctgaaagaaa gaaacatgct tctaacccta
301 gagcaggagg ccaagcggca gagattgcca atgccaagtc cagagcggtt agataaggta
361 gtagattcca tggatgcatt agataaagtt gtccaggaaa gagaagatgc cctaaggctt
421 cttcagactg gtcaagaaag agctagacct ggtgcttgga gaagagacat ctttggaaga
481 atcatctggc acaagttcaa gcagtgggtt ataccttggc acctaaataa aagatacaat
541 aggaaacgat tctttgcctt gccttatgtg gaccattttc tcagactgga acgtgagaaa
601 cgagcccgca tcaaagcacg gaaggaaaat ttagagagaa agaaagcaaa aattctttta
661 aaaaagtttc cacatcttgc tgaagcccaa aagtcaagtc ttgtctaaga tgtctgaact
721 attaaattta ccattttgtt tttcttgaat agtctgtgta caggagtaaa tatgttaagt
781 ggtttataaa gaaattctgt ttttagtcaa gtgactttac taatcagttg ttctaagtgt
841 gaatatggca tgctaattag ctaatttggt agaagctaat ttgcttctaa aaatcaggta
901 taaagttcag atgagattcc cactttataa attctgacat ttaagcaggc tttaaatgtc
961 acctgctacc ttagagtgtg aaggtgatgg taactgccac agcaaaggca ataccgtagt
1021 ttttgaattt gaataatagt tttacctctg ttgttaatag gctatgaaga ggatgtgggt
1081 attgctgtta ataaacggag gactttgatt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaa
//