LOCUS BC032508 3715 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens PNMA-like 1, mRNA (cDNA clone MGC:45422
IMAGE:5246377), complete cds.
ACCESSION BC032508
VERSION BC032508.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3715)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3715)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39780596.
FEATURES Location/Qualifiers
source 1..3715
/db_xref="H-InvDB:HIT000092688"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45422 IMAGE:5246377"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3715
/gene="PNMAL1"
/db_xref="GeneID:55228"
/db_xref="HGNC:HGNC:25578"
CDS 285..1604
/gene="PNMAL1"
/codon_start=1
/product="PNMA-like 1"
/protein_id="AAH32508.1"
/db_xref="GeneID:55228"
/db_xref="HGNC:HGNC:25578"
/translation="MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLN
GVLSPLGPYRVLNKIFVREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQ
DAEFLKNLNEFLDAEGRTWEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQI
IFCMDAEIRSREEARAQEAAEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNW
NATEDQHEPTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEV
GDAESMAISEPIKGSRKPCVNKEELALKKPMAKCAWKGPREPSQDARAEAESPGGASE
SDQDGGHESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKG
PGSRREASDQKAPRGQQPAEATASTSRGPKAKPEGSPRRATNESRKV"
BASE COUNT 972 a 868 c 1009 g 866 t
ORIGIN
1 cgccaacctc ggcttcttgc cgctaacggc atcgagtctg gacgccccgt gacccgcctg
61 ggccggagcg agggcggacg gcgccttctt ggccctttct gcctctagca gcggcgccgg
121 ggtagccgga gccagcgact gggaaacggc tgcattccac tgcgtctcct tggcctggct
181 gggcggtcgg aggctggtct gccaagatta ctgtttggag accgctgcag cccacgtcca
241 cctgatagac tatttactac acatagtaga ttcagagccg ctaaatgtcc aagaccatgg
301 cgatgaacct tctggaggat tggtgcaggg gaatggaagt ggacatccac aggtccttgt
361 tggtcacagg catcccagag gactgtgggc aggcagaaat tgaggagacc ttgaatgggg
421 tcctctcccc actgggcccg taccgcgtgc tcaacaagat ttttgtgagg gaagagaatg
481 ttaaagctgc cctcattgag gttggtgaag gtgtgaatct gagcaccatc ccccgtgaat
541 tcccaggaag gggtggtgtc tggagagtgg tctgtagaga ccctacccag gatgccgagt
601 ttttaaaaaa tctgaatgaa ttcctggatg ccgaggggcg cacctgggag gatgtggtcc
661 gcctgctcca gctcaaccac cccaccctgt cccagaacca gcatcagccc ccagagaact
721 gggcagaagc tctgggggtg cttctgggag cagtggtgca gatcatcttc tgcatggatg
781 ccgagatccg cagccgggag gaagccaggg cccaggaggc cgctgaattc gaggagatgg
841 cagcctgggc tttagcagca gggaggaagg tgaagaaaga accggggctt gcagcagagg
901 tgggttctgc cttaaaggca gagaccccca acaactggaa tgccacggaa gaccagcatg
961 agcctaccaa acctttggtt cgcagggctg gagctaagtc tcgctccagg agaaagaagc
1021 agaagaagaa ctccaggcag gaagcagtgc cctggaaaaa acccaaaggc atcaattcca
1081 acagcacagc taacttggag gatcctgagg tgggtgatgc tgaaagcatg gcgatctcag
1141 agccgatcaa gggcagcaga aagccctgtg tgaataagga ggagttggct ttgaagaagc
1201 ccatggcgaa atgtgcctgg aagggtccca gagagccatc tcaggatgcc cgggcagaag
1261 ccgagagccc aggaggcgcc tctgagtcag accaagatgg tggccatgaa agcccaccaa
1321 agaagaaggc cgtggcctgg gtgtctgcca agaaccccgc tcccatgagg aagaagaaga
1381 aggtgagctt gggccctgtc tcctacgtct tggttgactc agaagatggc aggaagaagc
1441 cggtgatgcc aaagaaaggg ccaggctcaa gaagggaggc atcagatcag aaggcccctc
1501 ggggccagca gcctgccgag gcaacagcct caacctctag gggtccgaag gccaagccag
1561 aaggctctcc tcggcgtgcc accaatgaat ccagaaaggt ttgatctggg ggaccaccca
1621 tactgaggag ttgaaagaac aaggaagaag taccaagtca accaagttct ctcttgtcac
1681 tgaataagac tttggactct cttagggccc ctgttgatag agatctggcc ctgaggtaaa
1741 cgataggtga ggtcttgggt gggagggagt tggggaaggg aggtggatct ctatgccctt
1801 ttctctacca ggcctgccgt ttcaccgcct tctctactca ccttctcttc ggaggcagga
1861 gagttggtaa gaggattggg aaaattctag aacattcatt cccctttatg catgagcagg
1921 gtcactgtta cactcatcca tgttcagctt ttctccccca cgccttgctc cctcctcgga
1981 atggtcagcg acctctgcag gccctggcat ttggaagagc tgggtggccc tgccatattc
2041 ttcctcccgc cttcctcttg tgtaaccagc ggggtaagtt aagccaggac cttcgctgca
2101 aacctggttt tattgctcct tcagtctcca gcttccatcc tccagttatc tagccaggag
2161 gtcccaagag ttagttttag ggaaaaagaa tgtctgccta gacctcaaag tctttgagtt
2221 ttagagtctg ttagtaaaaa tggcactttg attcccattt gggatgagcc ctctcaggaa
2281 tcctgtgggg aaggggggtg attataggga aggacgcagg cattcctagg tccccagctc
2341 taattccatc catctaccca actgtcacca tctttgcacc aaactgtcac catctttgca
2401 gcagaaggtc actactcaca ttatagtaag aggggaaaaa aatcttttaa aacttggctg
2461 ttggccgggc acggtggctc acgcctgtaa tcccagcact ttgggaggct gaggcaggtc
2521 gatcacgagg tcaggcgttt aagaccagct tgaccaacat ggtgaaaccc catctctaca
2581 aaaattagct gggcgtggtg gcgcgcgcct gtaatcccag ctactcagga ggctgaggca
2641 gatgaattgc ttgaatccag gaggcagagg ttgcaatgag ccaagattgt gccacggcac
2701 tccagcctgg gcagcagagt gagactctct ctcaaaaaaa caaaacttgg ctgttaatgt
2761 ctgccctctg aattcagaca cactatatta gaccagacca ccatgtgtca ttgtgtgtgt
2821 gtgtgtgtgt gtgtgtgttt gcgtgcgcat gtgtagagga gagagcaggg tccctgagat
2881 aatggtttcc aaactgtatc gtagccgtcc acaaagatgt aatccaaatc tatttttctc
2941 acgtgtttaa aaaactgaaa agtgactact cagatatgtt ggaagtcaca tcgaagacta
3001 tcagaatatt accttgtgtt cataggttaa cttgtttttg tacacgtctt agttatttca
3061 ggcatctctt tgcttaaaat tgagtttctt gtaaatgtga ctgatgagcg aggttagaag
3121 tggaagaaat tcctgtgcat gttctataat ctgacaccct gaaagcaagt ttcctttcgt
3181 cattcacatg ctcttgttct gccgtgactg ttcaggtgta tggtagtaag taaatgtatt
3241 aacatggtga acagtagtaa tattctatca tagagtatta gcccttgcaa gttttcaggg
3301 cgtcttttcc gacttcagtt tttgtgataa agaatgtgaa cagttgttag atgttctcag
3361 tgattcaact ttaaaacaaa tttctcgtga tgattcattt caaaatcctg agtgagtctg
3421 actgaaaaat acgagagaaa agagagtggt ttccgtttgc agctacacag ctgtgtgcat
3481 cgacgttctc ctggggtgtg tgccaagcga aacccagggg tgaattggat tcttgaagag
3541 accaaagcct gtaactgtcc agcttctaat ttcaaaacgg gtccattagg gcttcgttgt
3601 gttaacaagt tgacaccatg actagtaaat gtaaacgtgt atgtataaaa taaagtttag
3661 caaattaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//