LOCUS BC032501 3119 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nuclear receptor subfamily 5, group A, member 1, mRNA (cDNA clone MGC:45252 IMAGE:5227690), complete cds. ACCESSION BC032501 VERSION BC032501.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3119) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3119) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: a Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24432033. FEATURES Location/Qualifiers source 1..3119 /db_xref="H-InvDB:HIT000041571" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45252 IMAGE:5227690" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3119 /gene="NR5A1" /gene_synonym="AD4BP" /gene_synonym="ELP" /gene_synonym="FTZ1" /gene_synonym="SF-1" /gene_synonym="SF1" /db_xref="GeneID:2516" /db_xref="HGNC:HGNC:7983" /db_xref="MIM:184757" CDS 188..1573 /gene="NR5A1" /gene_synonym="AD4BP" /gene_synonym="ELP" /gene_synonym="FTZ1" /gene_synonym="SF-1" /gene_synonym="SF1" /codon_start=1 /product="nuclear receptor subfamily 5, group A, member 1" /protein_id="AAH32501.1" /db_xref="GeneID:2516" /db_xref="HGNC:HGNC:7983" /db_xref="MIM:184757" /translation="MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNN KHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRD RALKQQKKAQIRANGFKLETGPPMGVPPPPPPAPDYVLPPSLHGPEPKGLAAGPPAGP LGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQPGLPYGYPEPFS GGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISI VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELT TVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKD AQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNN LLIEMLQAKQT" BASE COUNT 592 a 988 c 952 g 587 t ORIGIN 1 ggaggacgga cggacagggc cagcctgctg tccggctgcc gcccgccgtg gtgtgagggg 61 gtttctgcgc acccacagtc gccaccgtcc cacctgggct gccggagcct ccccctggac 121 ccctggtgcc cactgccacc ctcatccggt gtgagagcgc tgcttccgct tcgcggacgc 181 cgcgggcatg gactattcgt acgacgagga cctggacgag ctgtgccccg tgtgcgggga 241 caaggtgtcc ggctaccact acggactgct cacgtgtgag agctgcaagg gcttcttcaa 301 gcgcacggtg cagaacaaca agcactacac gtgcaccgag agccagagct gcaagatcga 361 caagacgcag cgcaagcgct gtcccttctg ccgcttccag aaatgcctga cggtggggat 421 gcgcctggaa gccgtgcgcg ctgaccgtat gaggggtggc cggaacaagt ttgggccgat 481 gtacaagcgg gaccgggccc tgaaacagca gaagaaggca cagattcggg ccaatggctt 541 caagctggag acagggcccc cgatgggggt gcccccgccg ccccctcccg caccggacta 601 cgtgctgcct cccagcctgc atgggcctga gcccaagggc ctggccgccg gtccacctgc 661 tgggccactg ggcgactttg gggccccagc actgcccatg gccgtgcccg gtgcccacgg 721 gccactggct ggctacctct accctgcctt tcctggccgt gccatcaagt ctgagtaccc 781 ggagccttat gccagccccc cacagcctgg gctgccgtac ggctacccag agcccttctc 841 tggagggccc aacgtgcctg agctcatcct gcagctgctg cagctggagc cggatgagga 901 ccaggtgcgg gcccgcatct tgggctgcct gcaggagccc accaaaagcc gccccgacca 961 gccggcggcc ttcggcctcc tgtgcagaat ggccgaccag accttcatct ccatcgtgga 1021 ctgggcacgc aggtgcatgg tcttcaagga gctggaggtg gccgaccaga tgacgctgct 1081 gcagaactgc tggagcgagc tgctggtgtt cgaccacatc taccgccagg tccagcacgg 1141 caaggagggc agcatcctgc tggtcaccgg gcaggaggtg gagctgacca cagtggccac 1201 ccaggcgggc tcgctgctgc acagcctggt gttgcgggcg caggagctgg tgctgcagct 1261 gcttgcgctg cagctggacc ggcaggagtt tgtctgcctc aagttcatca tcctcttcag 1321 cctggatttg aagttcctga ataaccacat cctggtgaaa gacgctcagg agaaggccaa 1381 cgccgccctg cttgactaca ccctgtgcca ctacccgcac tgcggggaca aattccagca 1441 gctgctgctg tgcctggtgg aggtgcgggc cctgagcatg caggccaagg agtacctgta 1501 ccacaagcac ctgggcaacg agatgccccg caacaacctg ctcatcgaaa tgctgcaagc 1561 caagcagact tgagcctggg ccgggggcgg ggccgggact gggggcggga ctgggggcgg 1621 ggcctgggcg gggccgcagc cacaccgctg gctctgcatg gttcattttc tgatgcccac 1681 cgaggagccc cagccccgtc ccagaggccg ctgcccctga gttctgacac tgtgtgtttg 1741 ggaagtgggt gaggctgggc agggcctggc ggaggtggag tggccactgg cacttgcctg 1801 ctgcttggag tgccccaagg aggtggctgt taaccacccg ccccgccccc tccctgctcc 1861 cagctctctc tcctggagtc tgaagcctgc aggtccgggg aggaggttcg ggattccctg 1921 gtgggcctcg acgtcccttg gatcagaggt catcccttcc tcctctcctg gaaacagaca 1981 gggagaagtt gagcaggtat caactagggg aggagagagg gtctccagtg ttccccccat 2041 agagaccagg agggagagcc tctgttttgt aaactaagga taaccgagtt tgctaaattg 2101 agaggggcta ttgggcccta gaggacacta ggagactggt taggacaaaa agaccttctc 2161 cctagccctt ctaccccacc tgacctctgc aagagggggc attgatacat catcgggaaa 2221 aaactttgct ccaggcatca ctgattccct ctcccaccca aggagaacgt ttggtacaat 2281 cgacatccta gccccaccca gaggtggccc tcccaggctg gtatttatct gcaaggttgt 2341 agtcaagagg tttttctccc cgctttttgt ttttaagctt ctagacactc cttgaaatgt 2401 gtgtgtgatg gagggaaggg gacagatttg aggactgaag ctggggcttg gggattgcca 2461 ctaagtacag ctgatggttt ctccccggac actcgcctac taagtaccct tggggtggtg 2521 ctgggtcatt acttctgagc cccagcccca atccagagaa gcgctgttgc ccgccctcca 2581 cccactaggt gaacagcagg atgccctgtt gggggcttca ggtctctgtg ggtgggaatg 2641 caagtgaact tgggaggggg cacgggcctg tagatcaggg atagcgctgt tgatcccctc 2701 tctgtggctc caacccgttg ggtcccttgc tgcaaaccca tgaagctggc cctcagctcc 2761 ctgaccccct gtcctaggtc atgaaggaca ctctgcaggg tgaagcacca gggagaggcc 2821 tcggctgtct cctgtccccg gcggggtgcc tgctgtccgt cccgctttca tgttactgtt 2881 gcagcttgtg ctgagcctgc ccagttggag gagactgggc acccctgcct cctgcctccc 2941 gcctcccgcc accctgtctc agtacctccc ccccccgccc cctgaaacat gtgcccctgc 3001 caaggccgga gacccacagc cctgaaacga gaagtgccct taaggatcac cccagccccc 3061 acagccctgg aataaatttc gcaattagtt tccaaaaaaa aaaaaaaaaa aaaaaaaaa //