LOCUS BC032488 2440 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens AT rich interactive domain 5A (MRF1-like), mRNA (cDNA
clone IMAGE:5219759), with apparent retained intron.
ACCESSION BC032488
VERSION BC032488.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078221
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2440
/db_xref="H-InvDB:HIT000092681"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5219759"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 527 a 815 c 732 g 366 t
ORIGIN
1 cggacagccg cgcgctgagg gtctcggggc gggcgccgcg ggacctctcc gggccatggc
61 agcccctgtc aaagggaaca ggaagcagtc cacggagggt gacgccctag acccacctgc
121 atcccccaaa cctgctggca agcagaacgg aatccagaac cccatctcgc tggagttaac
181 ctgtggaaga tctacaaagc agtggagaag ctgggggcct atgagctggt aaggaaggca
241 cctcccagtc cttgccaaac tgcatatccc tggggtgagc ctgcagcgct gtccttgcct
301 ctggacagag gaagagccag gatccccagt cctacccctg cgtccctgcc tccctgcctt
361 ccccgctggt actctgctgc tcaaagcagc ttttcagcct tccccatctg ttctgcccgc
421 cccgtgttgg gaaaactgct tgggccagca gtccatggcc ctaggagaga gaatcggctg
481 gccgctgctg gagccgcaga gcagctgcca aactgcagtc cttcgagtcc ctgcgagggc
541 ggccggagct gcaaggaccc cgccgccagg gggcgcccgc cggccgcgcc ctcacgaggt
601 gcccttgcag gtgaccgggc gccgcctctg gaagaacgtg tacgacgagc tggggggcag
661 cccaggcagc accagcgcgg ccacgtgcac gcgccgccac tacgagaggc tggtcctgcc
721 atacgtgcgg cacctgaagg gggaggatga caagccgctg cccacctcca agcccaggaa
781 acagtacaag atggctaagg agaacagggg ggatgatggg gccaccgaga ggccgaagaa
841 ggccaaggag gagcggcgca tggaccagat gatgccagga aagaccaaag cagatgctgc
901 tgacccagca ccacttccca gccaggagcc ccccaggaac agcacagaac agcagggcct
961 ggcctctggg tcttctgtgt cctttgtggg tgccagcggc tgtcctgagg cctacaagcg
1021 gctcctatcc agcttctact gcaaggggac acacggcatc atgtcaccac tggccaaaaa
1081 gaagctcctg gcccaggtga gcaaggtgga ggccttgcag tgccaggagg agggctgccg
1141 ccatggggca gagccccagg cgtccccagc tgttcacctc ccagagagtc cccagagccc
1201 caaagggctg actgagaact ccaggcaccg gctgacccct caggagggat tgcaggcccc
1261 aggtggcagc ctcagagagg aggcgcaggc aggcccctgc ccggcagccc ccatcttcaa
1321 gggctgcttc tacacccacc ccaccgaggt gctgaagcct gtcagccagc accccaggga
1381 cttcttctct agacttaaag atggggtgct attggggcct cctggcaaag aggggctgtc
1441 agtgaaagag ccccagctgg tgtggggcgg agacgctaac cgcccttctg cgttccataa
1501 aggtggctcc agaaagggca tcctctaccc caagcccaaa gcctgctggg tgtcccccat
1561 ggccaaggtc ccagccgaga gccccacgct cccgcccacc ttccccagta gcccaggcct
1621 gggcagcaag cgcagcctgg aggaagaggg tgctgcccac agtgggaaga gactgcgggc
1681 cgtgtctccc tttcttaagg aggcggatgc caagaagtgt ggggccaaac ctgcagggtc
1741 cggcctggtc tcctgccttc tgggcccagc cctggggcct gtgcccccag aggcctacag
1801 gggcaccatg ctgcactgcc cgctgaactt cactggcacc ccgggcccct tgaagggcca
1861 ggctgcactc cccttcagcc ccctggtcat cccggccttc ccggcccact tcctggccac
1921 cgcaggcccc tcgcccatgg ccgctggcct gatgcacttc cccccaacgt ccttcgacag
1981 tgccctccgc cacagacttt gcccggcctc atctgcctgg cacgcaccac cagtcacaac
2041 ctatgcagcg ccccacttct tccacctcaa caccaagctg taggccagcc catggtgttg
2101 tgtacactgt ggagtcgaca ggggcctaca acaggcaggt actgctgcca gggggctctg
2161 aactagtgcc tgctacccag gacacccggg ccatgcccct ggctgggcag cctggcacaa
2221 gtgaagaaga aggcagtggg aaaactgggt ttatctcaag gcagcagcct gagcccagga
2281 gcagaggacc cagttgttat aaggcgctgg gagaggatgg gcagctccca ctgccccaga
2341 gcggagctcg aagcacccag gttgcccacg gaaaatccaa taaaaagaca ccagtgtgaa
2401 tccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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